| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2397 |
|---|
| Symbol | hisS |
|---|
| ID | 4599497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2554390 |
|---|
| End bp | 2555745 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639777000 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_923589 |
|---|
| Protein GI | 119716624 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.165814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC CCACCCCGCT GAGCGGGTTC CCCGAGCTGC TGCCCGAGCA GCGGGTCGTC
GAGCAGCAGG TCGTCGACAC CCTCCGGCAC ACGTTCGAGC TCTACGGCTT CGCGGGCATC
GAGACCCGGG CCGTCGAACC GCTCGACCAG CTGCTGCGCA AGGGCGACAC CTCCAAGGAG
GTCTACCTCC TGCGCCGGCT GCACGAGGAG TCGGCGGAGG GGCACTCCGG CATCGGGCTG
CACTTCGACC TGACCGTGCC GTTCGCGCGC TACGTGCTCG AGAACGCCGG CAGGCTGGAG
TTTCCGTTCC GCCGCTACCA GATCCAGAAG GCGTGGCGCG GCGAGCGGCC GCAGGAGGGC
CGCTACCGCG AGTTCACCCA GGCCGACATC GACGTCATCG GCCGCGACGA GCTGCCCTTC
CACCACGACG TCGAGGTCAC CCGGGTGATG GTCGACGCAC TGAACCGGCT CGACTTCTTG
CCGGCGTTCC GGCTCCAGGT GAACAACCGC AAGCTGATCC AGGGTTTCTA CGCCGGCCTG
GGCGTCGCCG ACACCGACGA GGCGATGCGG ATCGTCGACA AGCTCGACAA GCTCCCGGTC
GAGAAGGTGC GCGCGATGCT GGTCGCCGAG GCCGGCGTCG ACGAGGCGAC CGCCGACCGC
GTGCTGTCGC TGGCGACGAT CCGCGCCACC GACGACTCCT TCGTCGACGC CGTCCGGGCG
CTGGGCGTCG AACACCCGCT GCTCGACGAG GGCCTGGCCG AGCTCGGTGC ACTGGTGCGG
GCGTGTGCCG ATCTCGTCAG CGACCGGGTG CAGGTCGTCG CGGACCTCTC GATCGCGCGC
GGCCTCGACT ACTACACCGG CACGGTCTTC GAGACCCGGC TCGACGGCTA CGAGTCGCTG
GGATCGATCT GCTCCGGCGG TCGCTACGAC GCGCTCGCGT CCGACGGCCG CACGACGTAC
CCCGGCGTCG GCATCTCGCT CGGCGTCAGC CGGGTCGTCG TGCCGCTGAT GGCGCGCACC
GGCCTGGCGG CCAGCCGCAA GGTGCCGAGC GCCGTCGTGG TCGCGGTCGT CTCCGAGGAG
TCGCGACCCG AGAGCGAGGC GGTCGCCGCC GCCCTGCGTG CCCGCAACAT CCCCTGCGAG
GTCGCGGCGA GCGCGCAGAA GTTCGGCAAG CAGATCCGGT ACGCCGAGCG GCGGGGCATC
CCGTACGTCT GGTTCCCGGA CCAGGCCGAG GTGAAGGACA TCCGGTTGGG GGAGCAGGTG
GCGGCCGACC CCGCCTCCTG GACCCCACCC ATCGAGGACC TGCGACCGCA GGTCGTTGCG
ACGAGCCCGA CAAGCGAGAT GGAGAGTACG AAGTGA
|
|---|
| Protein sequence | MAKPTPLSGF PELLPEQRVV EQQVVDTLRH TFELYGFAGI ETRAVEPLDQ LLRKGDTSKE
VYLLRRLHEE SAEGHSGIGL HFDLTVPFAR YVLENAGRLE FPFRRYQIQK AWRGERPQEG
RYREFTQADI DVIGRDELPF HHDVEVTRVM VDALNRLDFL PAFRLQVNNR KLIQGFYAGL
GVADTDEAMR IVDKLDKLPV EKVRAMLVAE AGVDEATADR VLSLATIRAT DDSFVDAVRA
LGVEHPLLDE GLAELGALVR ACADLVSDRV QVVADLSIAR GLDYYTGTVF ETRLDGYESL
GSICSGGRYD ALASDGRTTY PGVGISLGVS RVVVPLMART GLAASRKVPS AVVVAVVSEE
SRPESEAVAA ALRARNIPCE VAASAQKFGK QIRYAERRGI PYVWFPDQAE VKDIRLGEQV
AADPASWTPP IEDLRPQVVA TSPTSEMEST K
|
|---|
| |