| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2392 |
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| Symbol | |
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| ID | 4599492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2547105 |
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| End bp | 2549336 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639776995 |
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| Product | RelA/SpoT family protein |
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| Protein accession | YP_923584 |
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| Protein GI | 119716619 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.997464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCGC GGTTCGCGCG GATGGGCGCC CGCAACCAAG GCGCGAACCC GGTCCTGGAG
CCGCTGTTCC GCTCGGTGCG GGCCAACCAC CCGAAGGCCG ACCTGGCCCT GCTGGAACGC
GCGTACACCA CCGCGGAGCG GATGCACGGG ACCCAGACCC GCAAGAGCGG TGACCCGTAC
ATCACCCACC CGCTCGCGGT GACGACGATC CTCGCCGACA TCGGCATGAC CGAGCCGACG
CTCGCCGCGG CCCTGCTGCA CGACACGGTG GAGGACACGC CGTACACCCT CGAGCAGGTG
CGTCAGGACT TCGGCGAGGA GATCGCCCAG CTGGTCGACG GCGTGACCAA GCTCGACAAG
GTGAAGTACG GCGACTCCGC GCAGGCCGAG ACGATCCGGA AGATGATCGT CGCGATGTCG
CGCGACATCC GGGTCCTGGT CATCAAGCTC GCCGACCGGC TGCACAACAT GCGGACCCTG
CGCTACGTGC GGCAGGAGAC CCAGGAGCGG GTCGCCCGCG AGACGCTCGA CATCTACGCG
CCCCTGGCCC ACCGGCTGGG CATGAACACG ATCAAGTGGG AGCTCGAGGA CCTGGCGTTC
GCGACCCTGC ACCCCAAGAT CTACGACGAG ATCGTCCGGA TGGTCGCGGA GCGGGCGCCG
TCACGGGACC AGTTCCTGGC CGAGGTGATC GCCCAGGTGG AGGCCGACCT GCGCGAGGCG
AAGGTGAAGG CGTCGGTCAC CGGACGGCCC AAGCACTACT ACTCGATCTA CCAGAAGATG
ATCGTGGGCG GCCGGGAGTT CTCGGACATC TACGACCTGG TCGGCATCCG CGTCCTGGTC
GAGAACGACC GGGACTGCTA CACCGTCCTC GGAGTGCTCC ACTCGCGCTG GAACCCGGTG
CTGGGGCGGT TCAAGGACTA CGTCGCGATG CCGAAGTTCA ACATGTACCA GTCGCTGCAC
ACGACGGTCA TCGGCCCGCA GGGCAAGCCC GTCGAGCTGC AGATCCGGAC CTTCGCGATG
CACCGGCGCG CGGAGTACGG CGTGGCCGCG CACTGGAAGT ACAAGGAGGA CGGCCGCGCC
GGCGTCGACA CCGACCGGTC GGGCGACCTC GACGACATGA CCTGGGTGCG CCAGCTCCTC
GACTGGCAGA ACGAGATGGA GGACCCCGGG GAGTTCCTGG AGTCGCTGCG CTTCGAGATC
AACCGCGCCG AGGTCTACGT CTTCACCCCG CGCGGCGACG TGATCGCGCT GCCGACCGGT
GCGACCCCGG TCGACTTCGC GTACGCCGTG CACACCGAGG TCGGCCACCA CACGATCGGC
GCCCGGGTGA ACGGGCGCCT GGTGCCCCTG GAGTCCGGCC TCGAGAACGG CGACGTCGTC
GAGGTCTTCA CCTCCAAGGC CCCCACCGCG GGCCCGTCGC GCGACTGGCT CGGGTTCGTG
AAGTCCCAGC GCGCCCGCTC CAAGATCCGC CAGTGGTTCA CCAAGGAGCG TCGCGAGGAG
GCGATCGACC GCGGCAAGGA GCAGATCGCC AAGCTGATGC GCAAGGAGGG GCTGCCGCTC
AAGCGGCTGC TGTCCCACGA GTCGCTCACG TTGGCGGCGG GCCACTTCAA GCTGGCGGAC
GTCTCCGCCC TGTACGCCGC CGTGGGTGAG GGCAACCTGT CGGCGCAGTC GGTCGTCCGC
CGCGTCATCG ACGTCCACGG CGGGGACGGT GGCGCCGCCG AGGACCTCGC CGAGGGCGTG
ACGATCACCG GGCGACGCGG CCGGGCCAAG GCCCAGCCGG GTGGCGACGC CGGCGTGATC
GTCAAGGGCG CCCCGGACGT GTGGGTCAAG CTCGCGAAGT GCTGCACCCC AGTGCCGCCG
GACCCGATCC TCGGCTTCGT CACGAAGGGT GGGGGAGTCT CGGTGCACCG CCAGAACTGC
ACCAACGCCG CCAGCCTGCA GGCCCAGCCG GAGCGGCTCC TCGACGTCGA GTGGGCCCCC
ACCGGACAGT CCAGCTTCCT GGTCAACATC CAGGTCGAGG CACTGGACCG GGCCCGGCTG
CTCTCGGACA TCACGATGGC GCTCTCCGAC GCGCACGTGG ACATCCTCAG CGCCAACCTC
TCGACCACCC GCGACCGGGT CGCCAAGAGC CGGTTCACCT TCGAGATGGC CGAGGCCAAG
CACCTCGACA ACGTGCTCAA GGCGGTCCGT TCGGTACCCG GCGTCTTCGA CGCCTACCGC
GTCACGCAAT AG
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| Protein sequence | MRARFARMGA RNQGANPVLE PLFRSVRANH PKADLALLER AYTTAERMHG TQTRKSGDPY
ITHPLAVTTI LADIGMTEPT LAAALLHDTV EDTPYTLEQV RQDFGEEIAQ LVDGVTKLDK
VKYGDSAQAE TIRKMIVAMS RDIRVLVIKL ADRLHNMRTL RYVRQETQER VARETLDIYA
PLAHRLGMNT IKWELEDLAF ATLHPKIYDE IVRMVAERAP SRDQFLAEVI AQVEADLREA
KVKASVTGRP KHYYSIYQKM IVGGREFSDI YDLVGIRVLV ENDRDCYTVL GVLHSRWNPV
LGRFKDYVAM PKFNMYQSLH TTVIGPQGKP VELQIRTFAM HRRAEYGVAA HWKYKEDGRA
GVDTDRSGDL DDMTWVRQLL DWQNEMEDPG EFLESLRFEI NRAEVYVFTP RGDVIALPTG
ATPVDFAYAV HTEVGHHTIG ARVNGRLVPL ESGLENGDVV EVFTSKAPTA GPSRDWLGFV
KSQRARSKIR QWFTKERREE AIDRGKEQIA KLMRKEGLPL KRLLSHESLT LAAGHFKLAD
VSALYAAVGE GNLSAQSVVR RVIDVHGGDG GAAEDLAEGV TITGRRGRAK AQPGGDAGVI
VKGAPDVWVK LAKCCTPVPP DPILGFVTKG GGVSVHRQNC TNAASLQAQP ERLLDVEWAP
TGQSSFLVNI QVEALDRARL LSDITMALSD AHVDILSANL STTRDRVAKS RFTFEMAEAK
HLDNVLKAVR SVPGVFDAYR VTQ
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