| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2381 |
|---|
| Symbol | |
|---|
| ID | 4599481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2537088 |
|---|
| End bp | 2538017 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639776984 |
|---|
| Product | pyridoxal biosynthesis lyase PdxS |
|---|
| Protein accession | YP_923573 |
|---|
| Protein GI | 119716608 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGACA GCCCCACCCC TGACAGCACC GCCAGCACCC CCACCACCGG CACCACCGGC
ACCACCCGCG TCAAGCGCGG CATGGCCGAG ATGCTCAAGG GGGGCGTGAT CATGGACGTG
GTCACGCCGG AGCAGGCGAA GATCGCCGAG GACGCCGGAG CGGTGGCCGT GATGGCGCTC
GAGCGGGTCC CGGCCGACAT CCGGGCGCAG GGCGGGGTGT CGCGGATGAG CGACCCCGAC
ATGATCGACG GGATCATCGA GGCGGTCTCG ATCCCGGTGA TGGCCAAGGC CCGGATCGGG
CACTTCGCCG AGGCGCAGGT GCTGCAGTCG CTCGGCGTCG ACTACGTCGA CGAGTCCGAG
GTGCTCACGC CCGCCGACTA CGCCAACCAC ATCGACAAGT GGGCCTTCAC CGTGCCGTTC
GTGTGCGGTG CCACCAACCT GGGCGAGGCG CTGCGGCGGA TCACCGAGGG CGCGGCGATG
ATCCGCTCCA AGGGCGAGGC CGGCACCGGC GACGTGTCCA ACGCCGTGAC CCACATGCGC
ACGATCCGAC GCGAGATCCG GCGGCTGGGT GCCCTCGAGT CCGACGAGCT CTACGTGGCC
GCCAAGGAGC TGCAGGCGCC GTACGACCTG GTCAAGGAGG TCGCCGAGCG CGGCAAGCTG
CCCGTCGTGC TGTTCACCGC GGGCGGGATC GCCACCCCGG CGGACGCGGC GATGATGATG
CAGCTCGGCG CTGAGGGCGT CTTCGTCGGC TCGGGCATCT TCAAATCCGG CAACCCCGCC
CAGCGTGCCG AGGCGATCGT GAAGGCCACC ACCTTCCACG ACGACCCCGA CGTGGTCGCG
AAGGTCTCCC GCGGTCTCGG TGAGGCCATG GTCGGCATCA ACGTCGAGGA GCTTCCCCAG
CCGCACCGGC TCGCCGAGCG CGGCTGGTGA
|
|---|
| Protein sequence | MVDSPTPDST ASTPTTGTTG TTRVKRGMAE MLKGGVIMDV VTPEQAKIAE DAGAVAVMAL
ERVPADIRAQ GGVSRMSDPD MIDGIIEAVS IPVMAKARIG HFAEAQVLQS LGVDYVDESE
VLTPADYANH IDKWAFTVPF VCGATNLGEA LRRITEGAAM IRSKGEAGTG DVSNAVTHMR
TIRREIRRLG ALESDELYVA AKELQAPYDL VKEVAERGKL PVVLFTAGGI ATPADAAMMM
QLGAEGVFVG SGIFKSGNPA QRAEAIVKAT TFHDDPDVVA KVSRGLGEAM VGINVEELPQ
PHRLAERGW
|
|---|
| |