Gene Noca_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2372 
Symbol 
ID4599472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2528392 
End bp2528916 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content71% 
IMG OID639776975 
Producthistidine triad (HIT) protein 
Protein accessionYP_923564 
Protein GI119716599 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC CTGCCGGCCA CGAGCGCGAC GGGTTCGAGG GCTTCGACCG GCTCTGGACA 
CCGCACCGGA TGGCCTACAT CGTCCCGAGC ATCCCGGTCG ACGGCGACGG CTGCCCGTTC
TGCGCGATGG AGCACATGGC GCCCGAGGAC AGCCTCGTCG TGCACCGCGG CGAGACCTGC
TTCGTCGTCC TCAACCTGCA CCCCTACAAC CCCGGGCACC TGATGGTGCT GCCGCACCGG
CACGTCGCCG AGCTGGAGGA CCTCAGCGTC GAGGAGGTGA CCGAGCTGAT GACGACCACC
CAGCAGGCGG TCCGGGTGCT GCGCGAGATC GCCGGCCCGC ACGCCTTCAA CATCGGGGTC
AACCTCGGCG GGGTCGCGGG CGGCTCGCTC TCGCAGCACC TCCACCAGCA CGTGGTGCCC
CGCTGGTCCG GGGACGCCAA CTTCATCACC GTGCTCGGCG GCACCAAGAC GCTCCCGCAG
CTGCTCGCGG ACACGCGCCG CCTGCTCGTC GAGGCCTGGG CGTGA
 
Protein sequence
MTDPAGHERD GFEGFDRLWT PHRMAYIVPS IPVDGDGCPF CAMEHMAPED SLVVHRGETC 
FVVLNLHPYN PGHLMVLPHR HVAELEDLSV EEVTELMTTT QQAVRVLREI AGPHAFNIGV
NLGGVAGGSL SQHLHQHVVP RWSGDANFIT VLGGTKTLPQ LLADTRRLLV EAWA