Gene Noca_2356 details

Gene Information

• Locus tag: Noca_2356
• ID: 4595971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 2510784
• End bp: 2512790
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 639776955
• Product: PAS sensor protein
• Protein accession: YP_923548
• Protein GI: 119716583
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.621519
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGGGG ACCGGAGCGA GCCGCGCTCG CGCGCACATC CCGGCACGGC TTACGGGCTG 
GCCGGGTGCC TCGTGCTGCT CGCGGTGCTG GCCCGCGAGC CTGCGCTCGA CAGCCCGGGC 
TTCGCGACGG TCTGGCCGGC CGGCGGCCTC GCGGTCCTGT GGTTCGTGCT GCGAGACGCG 
CGCCTGCTCA GCTTGGACAC GCTCCTCCTT GCCGCCGCCG CGGCCACCGG CAACGCCGTC 
CTGGGGGCTG ATCCCCGCCT CAACGCGGTC TTCGTCGGCG TCACGGTCAC GCAGACGCTG 
CTCGCGGTCT GGCTGCTGCG CCGCTGGAGC CCGGAGCTGT GGGGCTGCGG GGGTGACCGG 
CCGCTCGACC GCCCCCGGAT GCTGCCGCGC TACGGGGGAG CGCTGGCCGT GGCCATGGCC 
GTCGGCGCGC TGCTCGGCAC GGCCGGAGCG GCGGCCGTCA GCGGGGAGTA CGAGCCGCTG 
TCGGGAGCGC TCTACTTCGG TCGCACGCTG GTCAGCAGCC TGATCGTCGT GACACTGGGG 
ATCCTGGTCG GGCAGTGGGT CTCGCGGCCC CGGCCGCGGG GCTCGCTGGT CGGCTACGGG 
CCGGTCGTGG AGCTGCTCGC TGCCTCGGGC TTCACCGCGG CCATGTACGG CTTGGCGTTC 
GCCTTCGACG ACCTGCCCCT CGTGTTCCCG CTGCTCGCCG CCACGGTGTG GTTCGGACTG 
CGGTTCAGCA CCCTCGCCAG CGCGGCGCAC TCCTTCGTGG TCGGAGTCGC CACGCAGGCG 
TTGACGATGA CCGGCTACGG CCCGTTCGCG GCCGTGGAGC GGGCCGACGT CGGCACCCTG 
CTCGCCGAGT TCTACGTCGC GACCATCGTG GTCACCGGCC TCGCTCTCTC GACCGGTCGG 
GACGAGCGGC AGGCGCTCTC GGCCGAGCTG CTGCGCACGC AGGAGGAGAC GCTGTACCAG 
GCCAGCCTGC GCGAGGCCGT GCTCGGCTCG ATGAACGAGG GCCTGTTCGT CCTCGACGAG 
GCCGGCAACC TGTTGGTGCA CAACGCCGCG GCGGCCGAGA TCTTCGGGCT CGCCTACGAC 
GAGGTCGACT GGGAGGTCCT GGCCGCGCGC TCCCGGCAGT GGGCCGACGG CAGTGCCGTC 
GGCACCCCGG AACGCCCGTC GATGCGCGCC CTGGCCGGCG AGACCGTGCG CGACGCCGAG 
CAGATGATCA CTCGTACGGA CGGCACGCAG CGGGTCGTCT CGGTCTCCGC GGTCCCGCTG 
CCGCGCGACG AGGTGCGGCA CCGGGCCCGG GCGCTGGTCA TCTTCCGCGA CATCTCCAGC 
GAGCACGCCC GGCGCGCGGA GCTGGCCGCG TTCGCCGGGG TCGTCGCCCA CGACCTGCGC 
AACCCGCTGG CCGCGATCGA CGGCTGGACC GAGATGATCG CCGACGAGCT GGACTCCGGG 
AACCTCAGCG CCGACCTGGC GCGCGACTTC GTCTCGCGGG TCCGGTCCTC CTCGCGCCGG 
ATGCGGGAGC TGATCCGGGA CCTGCTCGCG CACGCGACGG CCAGCCAGCG CGACCTCGAG 
GTCGAGCGGG TCGACCTCGC TGCGCTCGTC GCCGAGGTCG CGACCGCACG CCACGCCGAG 
TCCCGGGTGC GGGTCGACCC GCTGCCCGTC GTGCTGGCCG ACCCGGTGCT GGTCCGCCAG 
GTGCTGGACA ACCTGATCGG CAACGCGCTG AAGTACGTCG CCGCCGGGGT CGAGCCGGAG 
ATCGTCGTCC AGGGCTGCCG CACCGACTCG CGGATGGTGA CCGTGCAGGT CGCCGACAAC 
GGGATCGGCA TCCCGGCAGG AGAGCACGAG CGGGTCTTCG ACGAGTTCCA CCGGGCGCAC 
TACCGCGACT ACGAGGGGAG CGGTCTGGGC CTCTCGATCG TGCGCCGGAT CATCAGCCGG 
CACGACGGCA CGATCGTGGC CCGTGCGAAC CCGAGCGGTC AGGGCTCGAT GTTCGAGTTC 
ACCCTCCCGG CGTACGACGG AGAGTGA 

 

Protein sequence

MPGDRSEPRS RAHPGTAYGL AGCLVLLAVL AREPALDSPG FATVWPAGGL AVLWFVLRDA 
RLLSLDTLLL AAAAATGNAV LGADPRLNAV FVGVTVTQTL LAVWLLRRWS PELWGCGGDR 
PLDRPRMLPR YGGALAVAMA VGALLGTAGA AAVSGEYEPL SGALYFGRTL VSSLIVVTLG 
ILVGQWVSRP RPRGSLVGYG PVVELLAASG FTAAMYGLAF AFDDLPLVFP LLAATVWFGL 
RFSTLASAAH SFVVGVATQA LTMTGYGPFA AVERADVGTL LAEFYVATIV VTGLALSTGR 
DERQALSAEL LRTQEETLYQ ASLREAVLGS MNEGLFVLDE AGNLLVHNAA AAEIFGLAYD 
EVDWEVLAAR SRQWADGSAV GTPERPSMRA LAGETVRDAE QMITRTDGTQ RVVSVSAVPL 
PRDEVRHRAR ALVIFRDISS EHARRAELAA FAGVVAHDLR NPLAAIDGWT EMIADELDSG 
NLSADLARDF VSRVRSSSRR MRELIRDLLA HATASQRDLE VERVDLAALV AEVATARHAE 
SRVRVDPLPV VLADPVLVRQ VLDNLIGNAL KYVAAGVEPE IVVQGCRTDS RMVTVQVADN 
GIGIPAGEHE RVFDEFHRAH YRDYEGSGLG LSIVRRIISR HDGTIVARAN PSGQGSMFEF 
TLPAYDGE