Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2329 |
Symbol | |
ID | 4595944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2482842 |
End bp | 2487392 |
Gene Length | 4551 bp |
Protein Length | 1516 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639776928 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_923521 |
Protein GI | 119716556 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCTC TCGAACGGTT CAGCGAGCCG ACCCGCACCT GGTTCGGCGC GGCGTTCGCG ACGCCGACCC CGGCCCAGGA GGGGGCCTGG GCGGCGATCG GCGCCGACCG GCATGCGCTG GTCGTGGCAC CCACCGGCTC GGGCAAGACG CTCAGTGCGT TCCTGTGGAG CCTCGACCGG CTGATGACCA CCCCGCCGCC CGAGGACAAG CGGCACCGCT GCCGGGTGCT CTACATCTCC CCGCTGAAGG CCTTGGGCGT GGACGTCGAG CGCAACCTGC GGGCACCGCT CACCGGCATC CGGCACACCG CCGAGCGGCT CGGCACGACG GTCCCCGAGG TCCGGGTGGG CGTCCGCTCC GGCGACACCC CGGCCGCCGA CCGCCGCAAG CTGACCACGG CTCCCCCGGA CATCTTGATC ACCACCCCCG AGTCGCTGTT CCTGATGCTC ACCAGCCAGG CGCGGGAGTC GCTGCGCGGC GTCGAGACCG TGATCGTCGA CGAGGTGCAC GCCGTCGCCG GCGGGAAACG CGGCGCCCAC CTCGCGGTGA GCCTCGAGCG GCTCGACGCA CTGCTCGAGC GGCCCGCCCA GCGGATCGGC CTCAGCGCGA CCGTGCGCCC GCTCGAGGAG GTGGCCCGGT TCCTCGGCGG CACCGCCCCG GTCGAGATCG TCGCCCCGCC GAGTGAGAAG CAGTGGGACC TGCGCGTCGT CGTGCCCGTC GAGGACATGA CCGCTCCCGC GGAGTACGAC GAGGACACCG ACGACCCGCA GCGCGCCCAG TCGATCTGGC CGCACGTCGA GGAGCGGGTC GCCGACCTGG TCCAGCAGCA CCGCTCCACG ATCGTCTTCG CCAACTCCCG CCGGCTCGCC GAGCGGCTCA CCGCCCGGCT CAACGAGATC GCGACCGAGC GCGCGGCAGA CGCCGGTCTC GAGGCCCGCT CCGCTCGCAC CTCGACCAGC GGAGGACCGC CCGCGGCGAT CATGGCCCAG TCCGGGATCT CGACGAGCTC GACCGGCGAC CCGGGCACCA CCGTGATCGC CAAGGCCCAC CACGGCTCGG TGTCCAAGGA GCAGCGCGCG CTGATCGAGG ACGACCTCAA GCGCGGCCGG TTGCCCTGCG TGGTCGCGAC CAGCAGCCTC GAGCTCGGCA TCGACATGGG TGCGGTCGAC CTGGTGATCC AGATCGAGAG CCCCCCGAGC GTCGCCAGCG CGCTCCAGCG CGTCGGCCGG GCCGGCCACC AGGTCGGCGA GGTCTCTCGC GGCGTGCTGT TCCCCAAGCA CCGCGGCGAC CTCGCGCAGA CCGCCGTCGC CGTCGAGCGG ATGCGCACCG GCGCGATCGA GTCCCTGCGC GTCCCGACGA ACCCGCTCGA CGTGCTGGCC CAGCAGGTCG TCGCGGCCAC CGCCCTCGAC GCCTGGCCGG CCGACGAGCT GTTCGAGCTG GTCCGCCGCA GCGCTCCGTT CACCCAGCTC CCGCGCAGCG CCTACGACGC GACCCTCGAC CTCCTCGCCG GCCGCTACCC CTCCGACGAG TTCGCCGAGC TGCGCCCGCG CATCGTGTGG GACCGCGTCA CCGGCACCCT CACCGGTCGC CCCGGCGCCC AGCGCCTGGC CGTCACCAGC GGCGGCACCA TCCCCGACCG CGGGCTGTTC GGCGTGTTCC TCGTCGGAGG CACGGGACCC GGCCGTCGGG TCGGCGAGCT CGACGAGGAG ATGGTCTACG AGTCCCGGGT CGGCGACGTG TTCGCCCTGG GCGCGACCAG CTGGCGGATC GAGGACATCA CCCACGACCG GGTGCTGGTC ACGCCTGCGC CGGGCGTCCC CGGCCGGCTC CCGTTCTGGA AGGGCGACAC GCTCGGCCGG CCGGCCGAGC TCGGGGCCGC GATCGGCGCC TTCACCCGCG AGCTGGCCGC CCTGCCCCGC GACCGGGCGA CGGCGCGCGC GGTCCGCGAC GGGCTCGACG AGTACGCCGC CGGCAACCTG CTCACCTACC TGCACGAGCA GCTCGAGTCC ACCAACGTGC TGCCCAGCGA CCGCACCCTG GTGGTCGAGC GGTTCCGCGA CGAGCTCGGC GACTGGCGCC TGGTCGTCCA CTCCCCTTAC GGCACCCCGG TGCACGCGCC CTGGGCGTTG GCCATCAACG CCCGGCTGCG GGAGCGGTAC GGCGTCGACG GTCAGGCCGT GGCCTCCGAC GACGGCATCG TGATCCGCAT CCCCGACACC GAGTCCGAGC CACCCGGCGG CGACGTGATC GTCTTCGACC CCGACGAGGT CGAGGGGATC GTCACCACCG AGGTCGGCGG CTCCGCGCTG TTCGCGTCCC GGTTCCGCGA GTGCGCCGCC CGGGCCCTGC TGCTCCCCCG CCGCGACCCC GGCCGGCGCT CCCCGCTCTG GCAGCAGCGG CAGCGCTCCG CCGCGCTGCT CGAGGTCGCT GCGAAGTACC CCTCCTTCCC GATCGTGCTC GAGGCCGTGC GCGAGTGCCT CCAGGACGTC TACGACCTCC CCAGCCTGCT CGCGCTGATG CGGGGGGTCG ACCGGCGCGA GGTCCAGGTC GTCGACGTCG CGACCCACCA GCCCTCGCCG TTCGCCCGCA GCCTGCTGTT CGGCTACGTC GCGCAGTTCA TGTACGAGGG CGACTCGCCC ATCGCCGAGC GCCGGGCGGC CGCCCTCGCC CTCGACCAGG GCCTGCTCGC CGAGCTGCTG GGTCGCGCCG AGCTGCGCGA GCTGCTCGAC CCGGAGGTGC TCGCAGAGGT CGAGGCCGAG CTCCAGCGGC TCGCCCCCGA TCGCCGGGCC CGCGACCCGG AGGGCGTCGT GGACCTGGTC CGCCTGATCG GCCCTCTCGG CACCGACGAG GTGGCCGCCC GATGCGTTGC CGGCGCCGAC GTCGGCGAGT GGCTGGAAGC GCTCGGCCGG GCCCGGCGCG TGGTCCAGGT CCGGATGGCC GGCGCGGAGC GCTGGGCGGT GGTGGAGGAC GTCGGCCGGC TCCGCGACGG CCTGGGCGTG CCGGTGCCGC CGGGCACCCC CGACGTGTTC ACCGACCCGG TCGAGGACCC GCTCGGCGAC CTGGTGTCGC GCTACGCCCG TAGCCACGGT CCGTTCACGA CCGAGCAGGT CGCGGCCCGC CTGGGTCTCG GAGCGGCGGT GGTCCGGCAC ACACTGCAGC GGCTGGCCGC CCAGGGCCGG GTGCTCGACG GGGAGTTCCG GCCCTCCGGG AGCGGCACCG AGTGGTGCGA CGCCGAGGTG CTGCGCCGGC TCCGCCGGCG CTCGCTGGCC CGGCTGCGTC AGGAGATCGA GCCGGTGGAG CCGGAGGCGC TGGGCCGGTT CCTGGCCGCA TGGCAGCGCG TCGCGACGGG CTCGACCAGC CGAGGGGCGC GGCGCGGGGT GGACGGGGTC CTCGCCGTGG TCGACCAGCT CGCCGGCTGC GCCCTACCCG CCTCCGCGCT GGAGCCGCTG GTGCTCGCCG CCCGGGTGAG CGACTACGAG CCGTCGTACC TCGACGAGCT GACCGCCTCC GGCGAGGTCC TCTGGGCCGG CCACGCCGCG TTGCCGGGGT CCGACGGCTG GGTGTCGTTG CACCTCGCGG ACCAGGCGCA CCTCACGCTG CCGGAGCCGC AGCCGTTCGA GCACAGTGAA GCGCACCAGG CCGTCCTCGA CGCCCTGGCC CCGGGCGGCG CCTGGTTCTT CCGCCAGCTC TCCGACGCGG TCGGCTCCAC CAACGACGCC GCGCTCTCGG CGGCGCTCTG GGACCTCGTG TGGGCGGGCC GGATCAGCAA CGACACGCTC ACGCCGCTGC GCGCCCTGAC CCGCTCCGGC ACCCCCGCCC ACCGCACCCG CCGGCCGGCG CCGCGGGCCG GCCGCCCCTC GCGCTCCGGA CCGCCGGAGA CTGCCGGCCG CTGGGCGCTG CTGCCCGCGC TCGACACCGA CACCACCCGG CGCGCCCACG CGACCGCGGA GCGGCTGCTC GATCGCCACG GAGTGGTGAC CCGCGGGGCG GTGGTCAGCG AGCGGGTCCC AGGCGGCTTC GCGGCGGTCT ACAAGGTGCT CTCCGCCTTC GAGGACTCCG GGCGCTGTCG CCGCGGCTAC TTCGTCGCCG GGCTCGGCGC CGCCCAGTTC GGCACCGCCG GAGCCGTCGA CCGGCTGCGC ACGTTCTCGG AGGTGGCGGC GGAGGCCAAG CCGACCGCGG CGGCGCTCGC CGCGACCGAC CCGGCCAACC CCTACGGTGC CGCGCTGCCC TGGCCGGAGA CGAGCGGCCA CCGCCCCGGA CGCAAGGCGG GCGCGATGGT GGTGCTCGTC GACGGCGTCC TCACGCTGTA CGTCGAACGC GGCGGCCGCA CCCTGCTCAC CTGGTCCGAC GAGCCCGACC GGCTCGGCCC GGCCACCGCC TCGCTCGCCG AGGCCGCCCG GCGCGGGTCG TTGGGCCGGA TGACGGTCGA GCGCGCCGAC GGCGAGCAGC TGCTCGGCTC CGGTTCGACA CCGCTGCGCG CGGCGCTCCA GGCCGCCGGG TTCGTCGCGA CCCCGAAGGG GCTGCGGCTG CGGGCGGCCG CCGGTGCCTG A
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Protein sequence | MSALERFSEP TRTWFGAAFA TPTPAQEGAW AAIGADRHAL VVAPTGSGKT LSAFLWSLDR LMTTPPPEDK RHRCRVLYIS PLKALGVDVE RNLRAPLTGI RHTAERLGTT VPEVRVGVRS GDTPAADRRK LTTAPPDILI TTPESLFLML TSQARESLRG VETVIVDEVH AVAGGKRGAH LAVSLERLDA LLERPAQRIG LSATVRPLEE VARFLGGTAP VEIVAPPSEK QWDLRVVVPV EDMTAPAEYD EDTDDPQRAQ SIWPHVEERV ADLVQQHRST IVFANSRRLA ERLTARLNEI ATERAADAGL EARSARTSTS GGPPAAIMAQ SGISTSSTGD PGTTVIAKAH HGSVSKEQRA LIEDDLKRGR LPCVVATSSL ELGIDMGAVD LVIQIESPPS VASALQRVGR AGHQVGEVSR GVLFPKHRGD LAQTAVAVER MRTGAIESLR VPTNPLDVLA QQVVAATALD AWPADELFEL VRRSAPFTQL PRSAYDATLD LLAGRYPSDE FAELRPRIVW DRVTGTLTGR PGAQRLAVTS GGTIPDRGLF GVFLVGGTGP GRRVGELDEE MVYESRVGDV FALGATSWRI EDITHDRVLV TPAPGVPGRL PFWKGDTLGR PAELGAAIGA FTRELAALPR DRATARAVRD GLDEYAAGNL LTYLHEQLES TNVLPSDRTL VVERFRDELG DWRLVVHSPY GTPVHAPWAL AINARLRERY GVDGQAVASD DGIVIRIPDT ESEPPGGDVI VFDPDEVEGI VTTEVGGSAL FASRFRECAA RALLLPRRDP GRRSPLWQQR QRSAALLEVA AKYPSFPIVL EAVRECLQDV YDLPSLLALM RGVDRREVQV VDVATHQPSP FARSLLFGYV AQFMYEGDSP IAERRAAALA LDQGLLAELL GRAELRELLD PEVLAEVEAE LQRLAPDRRA RDPEGVVDLV RLIGPLGTDE VAARCVAGAD VGEWLEALGR ARRVVQVRMA GAERWAVVED VGRLRDGLGV PVPPGTPDVF TDPVEDPLGD LVSRYARSHG PFTTEQVAAR LGLGAAVVRH TLQRLAAQGR VLDGEFRPSG SGTEWCDAEV LRRLRRRSLA RLRQEIEPVE PEALGRFLAA WQRVATGSTS RGARRGVDGV LAVVDQLAGC ALPASALEPL VLAARVSDYE PSYLDELTAS GEVLWAGHAA LPGSDGWVSL HLADQAHLTL PEPQPFEHSE AHQAVLDALA PGGAWFFRQL SDAVGSTNDA ALSAALWDLV WAGRISNDTL TPLRALTRSG TPAHRTRRPA PRAGRPSRSG PPETAGRWAL LPALDTDTTR RAHATAERLL DRHGVVTRGA VVSERVPGGF AAVYKVLSAF EDSGRCRRGY FVAGLGAAQF GTAGAVDRLR TFSEVAAEAK PTAAALAATD PANPYGAALP WPETSGHRPG RKAGAMVVLV DGVLTLYVER GGRTLLTWSD EPDRLGPATA SLAEAARRGS LGRMTVERAD GEQLLGSGST PLRAALQAAG FVATPKGLRL RAAAGA
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