Gene Noca_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2329 
Symbol 
ID4595944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2482842 
End bp2487392 
Gene Length4551 bp 
Protein Length1516 aa 
Translation table11 
GC content76% 
IMG OID639776928 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_923521 
Protein GI119716556 
COG category[R] General function prediction only 
COG ID[COG1201] Lhr-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCTC TCGAACGGTT CAGCGAGCCG ACCCGCACCT GGTTCGGCGC GGCGTTCGCG 
ACGCCGACCC CGGCCCAGGA GGGGGCCTGG GCGGCGATCG GCGCCGACCG GCATGCGCTG
GTCGTGGCAC CCACCGGCTC GGGCAAGACG CTCAGTGCGT TCCTGTGGAG CCTCGACCGG
CTGATGACCA CCCCGCCGCC CGAGGACAAG CGGCACCGCT GCCGGGTGCT CTACATCTCC
CCGCTGAAGG CCTTGGGCGT GGACGTCGAG CGCAACCTGC GGGCACCGCT CACCGGCATC
CGGCACACCG CCGAGCGGCT CGGCACGACG GTCCCCGAGG TCCGGGTGGG CGTCCGCTCC
GGCGACACCC CGGCCGCCGA CCGCCGCAAG CTGACCACGG CTCCCCCGGA CATCTTGATC
ACCACCCCCG AGTCGCTGTT CCTGATGCTC ACCAGCCAGG CGCGGGAGTC GCTGCGCGGC
GTCGAGACCG TGATCGTCGA CGAGGTGCAC GCCGTCGCCG GCGGGAAACG CGGCGCCCAC
CTCGCGGTGA GCCTCGAGCG GCTCGACGCA CTGCTCGAGC GGCCCGCCCA GCGGATCGGC
CTCAGCGCGA CCGTGCGCCC GCTCGAGGAG GTGGCCCGGT TCCTCGGCGG CACCGCCCCG
GTCGAGATCG TCGCCCCGCC GAGTGAGAAG CAGTGGGACC TGCGCGTCGT CGTGCCCGTC
GAGGACATGA CCGCTCCCGC GGAGTACGAC GAGGACACCG ACGACCCGCA GCGCGCCCAG
TCGATCTGGC CGCACGTCGA GGAGCGGGTC GCCGACCTGG TCCAGCAGCA CCGCTCCACG
ATCGTCTTCG CCAACTCCCG CCGGCTCGCC GAGCGGCTCA CCGCCCGGCT CAACGAGATC
GCGACCGAGC GCGCGGCAGA CGCCGGTCTC GAGGCCCGCT CCGCTCGCAC CTCGACCAGC
GGAGGACCGC CCGCGGCGAT CATGGCCCAG TCCGGGATCT CGACGAGCTC GACCGGCGAC
CCGGGCACCA CCGTGATCGC CAAGGCCCAC CACGGCTCGG TGTCCAAGGA GCAGCGCGCG
CTGATCGAGG ACGACCTCAA GCGCGGCCGG TTGCCCTGCG TGGTCGCGAC CAGCAGCCTC
GAGCTCGGCA TCGACATGGG TGCGGTCGAC CTGGTGATCC AGATCGAGAG CCCCCCGAGC
GTCGCCAGCG CGCTCCAGCG CGTCGGCCGG GCCGGCCACC AGGTCGGCGA GGTCTCTCGC
GGCGTGCTGT TCCCCAAGCA CCGCGGCGAC CTCGCGCAGA CCGCCGTCGC CGTCGAGCGG
ATGCGCACCG GCGCGATCGA GTCCCTGCGC GTCCCGACGA ACCCGCTCGA CGTGCTGGCC
CAGCAGGTCG TCGCGGCCAC CGCCCTCGAC GCCTGGCCGG CCGACGAGCT GTTCGAGCTG
GTCCGCCGCA GCGCTCCGTT CACCCAGCTC CCGCGCAGCG CCTACGACGC GACCCTCGAC
CTCCTCGCCG GCCGCTACCC CTCCGACGAG TTCGCCGAGC TGCGCCCGCG CATCGTGTGG
GACCGCGTCA CCGGCACCCT CACCGGTCGC CCCGGCGCCC AGCGCCTGGC CGTCACCAGC
GGCGGCACCA TCCCCGACCG CGGGCTGTTC GGCGTGTTCC TCGTCGGAGG CACGGGACCC
GGCCGTCGGG TCGGCGAGCT CGACGAGGAG ATGGTCTACG AGTCCCGGGT CGGCGACGTG
TTCGCCCTGG GCGCGACCAG CTGGCGGATC GAGGACATCA CCCACGACCG GGTGCTGGTC
ACGCCTGCGC CGGGCGTCCC CGGCCGGCTC CCGTTCTGGA AGGGCGACAC GCTCGGCCGG
CCGGCCGAGC TCGGGGCCGC GATCGGCGCC TTCACCCGCG AGCTGGCCGC CCTGCCCCGC
GACCGGGCGA CGGCGCGCGC GGTCCGCGAC GGGCTCGACG AGTACGCCGC CGGCAACCTG
CTCACCTACC TGCACGAGCA GCTCGAGTCC ACCAACGTGC TGCCCAGCGA CCGCACCCTG
GTGGTCGAGC GGTTCCGCGA CGAGCTCGGC GACTGGCGCC TGGTCGTCCA CTCCCCTTAC
GGCACCCCGG TGCACGCGCC CTGGGCGTTG GCCATCAACG CCCGGCTGCG GGAGCGGTAC
GGCGTCGACG GTCAGGCCGT GGCCTCCGAC GACGGCATCG TGATCCGCAT CCCCGACACC
GAGTCCGAGC CACCCGGCGG CGACGTGATC GTCTTCGACC CCGACGAGGT CGAGGGGATC
GTCACCACCG AGGTCGGCGG CTCCGCGCTG TTCGCGTCCC GGTTCCGCGA GTGCGCCGCC
CGGGCCCTGC TGCTCCCCCG CCGCGACCCC GGCCGGCGCT CCCCGCTCTG GCAGCAGCGG
CAGCGCTCCG CCGCGCTGCT CGAGGTCGCT GCGAAGTACC CCTCCTTCCC GATCGTGCTC
GAGGCCGTGC GCGAGTGCCT CCAGGACGTC TACGACCTCC CCAGCCTGCT CGCGCTGATG
CGGGGGGTCG ACCGGCGCGA GGTCCAGGTC GTCGACGTCG CGACCCACCA GCCCTCGCCG
TTCGCCCGCA GCCTGCTGTT CGGCTACGTC GCGCAGTTCA TGTACGAGGG CGACTCGCCC
ATCGCCGAGC GCCGGGCGGC CGCCCTCGCC CTCGACCAGG GCCTGCTCGC CGAGCTGCTG
GGTCGCGCCG AGCTGCGCGA GCTGCTCGAC CCGGAGGTGC TCGCAGAGGT CGAGGCCGAG
CTCCAGCGGC TCGCCCCCGA TCGCCGGGCC CGCGACCCGG AGGGCGTCGT GGACCTGGTC
CGCCTGATCG GCCCTCTCGG CACCGACGAG GTGGCCGCCC GATGCGTTGC CGGCGCCGAC
GTCGGCGAGT GGCTGGAAGC GCTCGGCCGG GCCCGGCGCG TGGTCCAGGT CCGGATGGCC
GGCGCGGAGC GCTGGGCGGT GGTGGAGGAC GTCGGCCGGC TCCGCGACGG CCTGGGCGTG
CCGGTGCCGC CGGGCACCCC CGACGTGTTC ACCGACCCGG TCGAGGACCC GCTCGGCGAC
CTGGTGTCGC GCTACGCCCG TAGCCACGGT CCGTTCACGA CCGAGCAGGT CGCGGCCCGC
CTGGGTCTCG GAGCGGCGGT GGTCCGGCAC ACACTGCAGC GGCTGGCCGC CCAGGGCCGG
GTGCTCGACG GGGAGTTCCG GCCCTCCGGG AGCGGCACCG AGTGGTGCGA CGCCGAGGTG
CTGCGCCGGC TCCGCCGGCG CTCGCTGGCC CGGCTGCGTC AGGAGATCGA GCCGGTGGAG
CCGGAGGCGC TGGGCCGGTT CCTGGCCGCA TGGCAGCGCG TCGCGACGGG CTCGACCAGC
CGAGGGGCGC GGCGCGGGGT GGACGGGGTC CTCGCCGTGG TCGACCAGCT CGCCGGCTGC
GCCCTACCCG CCTCCGCGCT GGAGCCGCTG GTGCTCGCCG CCCGGGTGAG CGACTACGAG
CCGTCGTACC TCGACGAGCT GACCGCCTCC GGCGAGGTCC TCTGGGCCGG CCACGCCGCG
TTGCCGGGGT CCGACGGCTG GGTGTCGTTG CACCTCGCGG ACCAGGCGCA CCTCACGCTG
CCGGAGCCGC AGCCGTTCGA GCACAGTGAA GCGCACCAGG CCGTCCTCGA CGCCCTGGCC
CCGGGCGGCG CCTGGTTCTT CCGCCAGCTC TCCGACGCGG TCGGCTCCAC CAACGACGCC
GCGCTCTCGG CGGCGCTCTG GGACCTCGTG TGGGCGGGCC GGATCAGCAA CGACACGCTC
ACGCCGCTGC GCGCCCTGAC CCGCTCCGGC ACCCCCGCCC ACCGCACCCG CCGGCCGGCG
CCGCGGGCCG GCCGCCCCTC GCGCTCCGGA CCGCCGGAGA CTGCCGGCCG CTGGGCGCTG
CTGCCCGCGC TCGACACCGA CACCACCCGG CGCGCCCACG CGACCGCGGA GCGGCTGCTC
GATCGCCACG GAGTGGTGAC CCGCGGGGCG GTGGTCAGCG AGCGGGTCCC AGGCGGCTTC
GCGGCGGTCT ACAAGGTGCT CTCCGCCTTC GAGGACTCCG GGCGCTGTCG CCGCGGCTAC
TTCGTCGCCG GGCTCGGCGC CGCCCAGTTC GGCACCGCCG GAGCCGTCGA CCGGCTGCGC
ACGTTCTCGG AGGTGGCGGC GGAGGCCAAG CCGACCGCGG CGGCGCTCGC CGCGACCGAC
CCGGCCAACC CCTACGGTGC CGCGCTGCCC TGGCCGGAGA CGAGCGGCCA CCGCCCCGGA
CGCAAGGCGG GCGCGATGGT GGTGCTCGTC GACGGCGTCC TCACGCTGTA CGTCGAACGC
GGCGGCCGCA CCCTGCTCAC CTGGTCCGAC GAGCCCGACC GGCTCGGCCC GGCCACCGCC
TCGCTCGCCG AGGCCGCCCG GCGCGGGTCG TTGGGCCGGA TGACGGTCGA GCGCGCCGAC
GGCGAGCAGC TGCTCGGCTC CGGTTCGACA CCGCTGCGCG CGGCGCTCCA GGCCGCCGGG
TTCGTCGCGA CCCCGAAGGG GCTGCGGCTG CGGGCGGCCG CCGGTGCCTG A
 
Protein sequence
MSALERFSEP TRTWFGAAFA TPTPAQEGAW AAIGADRHAL VVAPTGSGKT LSAFLWSLDR 
LMTTPPPEDK RHRCRVLYIS PLKALGVDVE RNLRAPLTGI RHTAERLGTT VPEVRVGVRS
GDTPAADRRK LTTAPPDILI TTPESLFLML TSQARESLRG VETVIVDEVH AVAGGKRGAH
LAVSLERLDA LLERPAQRIG LSATVRPLEE VARFLGGTAP VEIVAPPSEK QWDLRVVVPV
EDMTAPAEYD EDTDDPQRAQ SIWPHVEERV ADLVQQHRST IVFANSRRLA ERLTARLNEI
ATERAADAGL EARSARTSTS GGPPAAIMAQ SGISTSSTGD PGTTVIAKAH HGSVSKEQRA
LIEDDLKRGR LPCVVATSSL ELGIDMGAVD LVIQIESPPS VASALQRVGR AGHQVGEVSR
GVLFPKHRGD LAQTAVAVER MRTGAIESLR VPTNPLDVLA QQVVAATALD AWPADELFEL
VRRSAPFTQL PRSAYDATLD LLAGRYPSDE FAELRPRIVW DRVTGTLTGR PGAQRLAVTS
GGTIPDRGLF GVFLVGGTGP GRRVGELDEE MVYESRVGDV FALGATSWRI EDITHDRVLV
TPAPGVPGRL PFWKGDTLGR PAELGAAIGA FTRELAALPR DRATARAVRD GLDEYAAGNL
LTYLHEQLES TNVLPSDRTL VVERFRDELG DWRLVVHSPY GTPVHAPWAL AINARLRERY
GVDGQAVASD DGIVIRIPDT ESEPPGGDVI VFDPDEVEGI VTTEVGGSAL FASRFRECAA
RALLLPRRDP GRRSPLWQQR QRSAALLEVA AKYPSFPIVL EAVRECLQDV YDLPSLLALM
RGVDRREVQV VDVATHQPSP FARSLLFGYV AQFMYEGDSP IAERRAAALA LDQGLLAELL
GRAELRELLD PEVLAEVEAE LQRLAPDRRA RDPEGVVDLV RLIGPLGTDE VAARCVAGAD
VGEWLEALGR ARRVVQVRMA GAERWAVVED VGRLRDGLGV PVPPGTPDVF TDPVEDPLGD
LVSRYARSHG PFTTEQVAAR LGLGAAVVRH TLQRLAAQGR VLDGEFRPSG SGTEWCDAEV
LRRLRRRSLA RLRQEIEPVE PEALGRFLAA WQRVATGSTS RGARRGVDGV LAVVDQLAGC
ALPASALEPL VLAARVSDYE PSYLDELTAS GEVLWAGHAA LPGSDGWVSL HLADQAHLTL
PEPQPFEHSE AHQAVLDALA PGGAWFFRQL SDAVGSTNDA ALSAALWDLV WAGRISNDTL
TPLRALTRSG TPAHRTRRPA PRAGRPSRSG PPETAGRWAL LPALDTDTTR RAHATAERLL
DRHGVVTRGA VVSERVPGGF AAVYKVLSAF EDSGRCRRGY FVAGLGAAQF GTAGAVDRLR
TFSEVAAEAK PTAAALAATD PANPYGAALP WPETSGHRPG RKAGAMVVLV DGVLTLYVER
GGRTLLTWSD EPDRLGPATA SLAEAARRGS LGRMTVERAD GEQLLGSGST PLRAALQAAG
FVATPKGLRL RAAAGA