Gene Noca_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2194 
Symbol 
ID4599101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp2343927 
End bp2344583 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID639776795 
Productregulatory protein, TetR 
Protein accessionYP_923388 
Protein GI119716423 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTCG ACGCTGAGAG GTGTCTGCGC GTCGATGCGG AGCGGAACCG CGAGCGCGTC 
ATCCACGCGG CACGCGAGGT CTTTGCCGAG CAGGGGCTTG AGGCCTCGAC CAACGAGATC 
GCCCGTCATG CCGGGGTCGG TGTTGCCACA CTCTTCCGTC GTTTCCCGAC CCGAGACGAG 
CTGGTCGCGG CGGCGTTCGC CGACAAGATG AACGCCTACG TCAGCGCCGT CGACGACGCG 
CTCGCCGACC CTGATCCATG GCATGGCTTC TGCGCCTACA TCGAACGCGT CTGCCGCATG 
CAGGCCGACG ACCGCGGCTT CGCCGACGTC CTCACCATGA CCTTCCCTAC CGCCAAGGCA 
TTCGAAGAGG AACGCAGAAG GTCCGCCGAG GCGCTGACCG AGCTGCTCGA ACGCGCGAAA 
GCCACCGGCC GGCTCCGCGA GGACTTCGCC CACCAGGACG TGCCCCTGAT CCTGATGGCC 
AACGCTGGCG TCGTCACCGC CACCAAGGAC GCCGCCCCTG AGGCATGGCG TCGCTTCGTC 
GGCTACCTCA TCCAGTCCTT TGCCGCCGAG GCCGCTCAGC CCCTCCCGGA CCCGCCCACG 
CATCGTCAGA TGTACCGAGC GCTCATGCGA CTGACGAAGA CATCAAGAAA AAGTTGA
 
Protein sequence
MHVDAERCLR VDAERNRERV IHAAREVFAE QGLEASTNEI ARHAGVGVAT LFRRFPTRDE 
LVAAAFADKM NAYVSAVDDA LADPDPWHGF CAYIERVCRM QADDRGFADV LTMTFPTAKA 
FEEERRRSAE ALTELLERAK ATGRLREDFA HQDVPLILMA NAGVVTATKD AAPEAWRRFV 
GYLIQSFAAE AAQPLPDPPT HRQMYRALMR LTKTSRKS