Gene Noca_2186 details

Gene Information

• Locus tag: Noca_2186
• ID: 4599093
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 2338217
• End bp: 2338930
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639776788
• Product: regulatory protein, TetR
• Protein accession: YP_923381
• Protein GI: 119716416

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCTGA GAGCAGACGC CGCCCGCAAC CGGGCCGCTA TCGTCGAGGC CGCCCGCGCC 
GTGTTCGCCG AGCAGGGTCT GGACGCACCG CTGGACGACA TCGCCCGTCA GGCGGGCACG 
GGCAACGCGA CGCTGTACCG GCGTTTCCCC ACGCGGGGTG ACCTGATCGC TGCGGTGTTC 
GCGGAGCGCA TGGCCGAGGA GCTGGACGCG GTCGAGGCAG CACTGGCCGA GCCCGACCCC 
TGGGACGGTT TCGCCTCATA CGTCACCGCG GTGGGTCTCA TGCAGGCCCG TGACCGCGGC 
ATCGCGGACC TGGTGACCAT GGACGTCACC CGAGCACCGG AGATCGAGGC CTTCAGGGCT 
CGTGCCTTTC AGGGTCTCGT CACGCTCGTC GACCGCGCCC GGTCCGCAGG CGTCCTGCGC 
CAGGACTTCA CCACCCAGGA CGTCGTACTC CTGCTGATGG CCAACGCGGG CCTCGTCGAG 
CGCGCCCACG ACATCTCCGA CGAGGCGTCG GCGCGGCTGG TCCACCTGGT CCTCGACGGC 
TTGCGGGCCT CCGCCGCCAC CGACGGCCCG GCGGCCCCCC AGGCCTCCGC CACCGAGGAG 
GCGATGCGCC GCAACAGCGA GCACCGCCTC GGTGCCGGCA CCCGCAAGAC CAAGGGCAGC 
AAGCCGGTCT GCCCGCAGAG CACCACCCCG TCCACTCCCG AGAAGGGCAA CTGA 

 

Protein sequence

MELRADAARN RAAIVEAARA VFAEQGLDAP LDDIARQAGT GNATLYRRFP TRGDLIAAVF 
AERMAEELDA VEAALAEPDP WDGFASYVTA VGLMQARDRG IADLVTMDVT RAPEIEAFRA 
RAFQGLVTLV DRARSAGVLR QDFTTQDVVL LLMANAGLVE RAHDISDEAS ARLVHLVLDG 
LRASAATDGP AAPQASATEE AMRRNSEHRL GAGTRKTKGS KPVCPQSTTP STPEKGN