Gene Noca_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2158 
Symbol 
ID4599218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2307387 
End bp2308535 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content63% 
IMG OID639776761 
ProductFormyl-CoA transferase 
Protein accessionYP_923354 
Protein GI119716389 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGT TGCAAGGCAT CACCGTCCTA GAGGTCGGCG GGTTTCTCGC TGCCCCGTGG 
GCCACGATGC ACCTGGCTGA CTTGGGAGCC AGAGTCATCA AGGTCGAGAT GGCCGGTCAA
GGCGACTCTG TCCGCCAGAC GGCCCCAATC GTCAACGGCG AGAGCGCGGC TTTCGCCACC
ATCAATCGCA ACAAAGAATC CGTCGTCCTC GATTTGAAGT CCCCCGACGG GATGTCCGCA
TTCTTGGAGC TGGTCCGGAA CACTGATGTT CTGGTCGAGA ACCTACGACC AGGAGCGATG
TCCAAACTGG GATTGGGGTA CTCAGACCTC GCACCCCGCG CACCATCGTT GATCTATGCC
TCGGCGTCCG GGTGGGGACA AGACGGCCCT GACGCCGGAC TGCCTGGGTT GGACATCATG
GCCCAAGCCC GCAGCGGTCT CATGAGCCTC ACTGGGTCGA TGGGTGGGCC CGCCGTCAAG
GTCGGCGTCC CGGTCTGCGA CCTCGTATGT GCACTGTATG TCGCGCTGGC TGTCACAGCC
GCGCTCCACG AGCGTCAGCG GTCCGGACTG GGCCAATTTA TCGACGTCTC GCTGCTCGAG
TCAGCGGTCT CTCTGGCCGT TTGGGAGGCC CCCCGATACT TTGTCAACGG CGAAGTTGGC
GCGCCTCTAG GGACCGCACA CCAAAGCCTC GCCCCATATC AGGCGTTTGG AACCAGCGAC
GGCAAAGTCA CTCTTGGCGC GGTCACGACC AAGACGTGGT CGGCACTGTG CGAGGTGCTT
GGCCTGCCCG AACTAGAACG AGACCCGAGG TTCGTCGACG GCGGGACACG ATTCCGCCAT
CGTGCAGAAC TGGCCGAAGT TCTCGAGGGG GCGACCCGGG CCTTCTCCAC CTCAGAGCTT
CTCGACAAGC TCATCCGTGC ACAGGTGCCA TGCGCAAGGA TCGCTGACAT CGAACAGGCC
CTCACAGATC CGCACCTAGC GGAACGCGAG TTCTTTTGGG ATTCCTCACA TCCGACCATC
GGGACCGTGC GACAGACGAG GTCGCCGATG CGGTTTTCGA GGACGCCGAC AGTCGCAGGT
CAGGCTGGGC CGCTTCTGGG CCAGCACACC CAGCAAGTCC TAGCGGAGTT CGGCGCGGGG
GAGGCGTGA
 
Protein sequence
MTTLQGITVL EVGGFLAAPW ATMHLADLGA RVIKVEMAGQ GDSVRQTAPI VNGESAAFAT 
INRNKESVVL DLKSPDGMSA FLELVRNTDV LVENLRPGAM SKLGLGYSDL APRAPSLIYA
SASGWGQDGP DAGLPGLDIM AQARSGLMSL TGSMGGPAVK VGVPVCDLVC ALYVALAVTA
ALHERQRSGL GQFIDVSLLE SAVSLAVWEA PRYFVNGEVG APLGTAHQSL APYQAFGTSD
GKVTLGAVTT KTWSALCEVL GLPELERDPR FVDGGTRFRH RAELAEVLEG ATRAFSTSEL
LDKLIRAQVP CARIADIEQA LTDPHLAERE FFWDSSHPTI GTVRQTRSPM RFSRTPTVAG
QAGPLLGQHT QQVLAEFGAG EA