Gene Noca_2151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2151 
Symbol 
ID4599211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2300416 
End bp2301231 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content64% 
IMG OID639776754 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_923347 
Protein GI119716382 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAC CAAGCGCGGC TCAAGCCACA TCAGCGATAC AGGACGCGGC CGACCGGCTG 
TCTGCCGCCG AGCAGACGAG GAAGCCCTGC GCCCCGGTTC GTGACCTCAT CGGCGCCGAT
GGCGCACGGG CCTACGAGGT GCAGCGCCGC AACGTTGAGC GCCGCAAACA AAGGGGCGCG
AGGGTCGTCG GAGCCAAGAT CGGACTAACA TCGCCTGCGG TCCAAAGACA ACTCGGTGTC
GACCAACCCG ATTTCGGGAT CCTCTTCGAC GACATGGAGG TTTCGGGCGC AGCCACCATT
GATTCGACGC GGCTGCTGCA ACCCCGCATC GAGGCCGAGG TTGCGTTTAT TCTCAAGTCC
GACCTAGACG GCCCCAATCT CGACGCTGGC TCAGCGCGGG CGGCAGTCGA CTACGCAGTG
CCGGCCCTGG AGATCGTCGA CAGTCGAGTC GAGTCCTGGG ATATCACCTT CGTGGACACC
GTCGCCGACA ACGCGTCGAG CTGCATGTAC GTACTCGGGG CGCAACGCCG GAGCCTCGAC
AGCTTCGAAC CTCGGGAGGT CACGATGGAG ATGACGGTCG ACGGAGCTAT GGCTTCGTCT
GGCTCTGGCA TCGACTGCCT CGGGGATCCG CTCGAGGCCC TCGCGTGGCT CGCCCGCACG
ATGAGAGATC TCGGGACGCC CTTGCGCAAG GACCAGGTCG TTCTCTCGGG TGCTCTCGGT
CCAATGGTCA CCGTTCACCC GGGTATGACG GCCGTGGCCA ACATCAACGG TCTCGGGACC
GTGTCCGCAT CTTTCGGCAT AGGAGAGAAG CCGTGA
 
Protein sequence
MNQPSAAQAT SAIQDAADRL SAAEQTRKPC APVRDLIGAD GARAYEVQRR NVERRKQRGA 
RVVGAKIGLT SPAVQRQLGV DQPDFGILFD DMEVSGAATI DSTRLLQPRI EAEVAFILKS
DLDGPNLDAG SARAAVDYAV PALEIVDSRV ESWDITFVDT VADNASSCMY VLGAQRRSLD
SFEPREVTME MTVDGAMASS GSGIDCLGDP LEALAWLART MRDLGTPLRK DQVVLSGALG
PMVTVHPGMT AVANINGLGT VSASFGIGEK P