| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2148 |
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| Symbol | |
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| ID | 4599208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2297087 |
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| End bp | 2298259 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639776751 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_923344 |
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| Protein GI | 119716379 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACA AGAAGAGGGC CTTGGCGCTA GTTGTCGCCG CTCTCACCGT GATGACGAGC
GCCGCATGCG GCAGCAGCGA AAACTCCGGA GACAGCGCCT CTGATGCCAT CAAGATCGGT
GCCGTCTTCA ACCTGACTGG CGACGGGTCC GTGCTCGGCG CCGACGAGAT CCGAGGCGCC
GAGGCGTTCG TCAAGCAGAT CAACGCCGAC GGCGGTCTCC TCGGTCGCGA CGTCGAGCTC
ATCACCATCG ACGCTGCATC TGACCCGCAG AAGGCCGCAG ACGCAGTGGC TCGACTCGCG
GAGCAGGAGC AGGTCTCGGT CATCATCGGC CCTGACGGTA CGCCGACCAC GATCGCAGCC
ATTCCCGCAG CGACTCGCGC GCAGACTCCA CTTGTCTCCA CGGGCGGATC CTGGTCGTAC
GGCATGTCTG GCGACGACCT GGAGTGGGCC TTCACGGCAA CCCCCCCGAC GACCGCGGGA
CTGGACGCCT ACGAGGAGTA CTGGGCCAGC ATCGGAGTGG AGAAGGTTGC AATCATCGGG
GCCGACACGC CCTTCCTCGA CGTGCCGAAG GGCTACTTCG AGAACAAGAC CGATGGCGTC
GAGTTGACCA CCCTTCAGAG TTTCTCGCCG GGCGCCACTG ACATTACGGC GCAGATGACC
ACGGTTCTCG ACTCCGACCC GGACTTCGTT CTCAGTTGGT CGACTGGCCC CGACGGTGTC
ACTGCGCTTA AGGCCCTCGA CTCGCTAGCC CCTGACATGC CGCGGGGACT CAACGGCGGC
ACAACAACCA CGGCCTTCGA AGAGATCGCC GGAGACCTTC TGGAGGGGAC GACTGCTTGG
AGCTACCGCT CCCAGGTCGT CGACACGCTG CCCGCCGGCC CTGGCAAGGA TGCCGTTCAG
GCGTACCTCG ACGGGATGGA GGCGGCCGGT GAGGACACCG TCGGTGGAGC TAGCAACGCA
ATCATGGCGT GGGACGCCAT GATCAGTGCT ACCGACGCAA TTGAGGCTGC CGATTCCACG
GACCCGAGTG AGGTCCGTGA CGCCCTGGAG ATCCAAAGCT TTGAAGGTGC GATCACACCG
TGGAAGCGCA CTCCTGACGA TCACGCCGGC GCACTGGGCG GGTACGTCCT GGTGAAGTAC
GACGATGGTC AGTGGCACCC CATCGACGAA TAG
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| Protein sequence | MTHKKRALAL VVAALTVMTS AACGSSENSG DSASDAIKIG AVFNLTGDGS VLGADEIRGA
EAFVKQINAD GGLLGRDVEL ITIDAASDPQ KAADAVARLA EQEQVSVIIG PDGTPTTIAA
IPAATRAQTP LVSTGGSWSY GMSGDDLEWA FTATPPTTAG LDAYEEYWAS IGVEKVAIIG
ADTPFLDVPK GYFENKTDGV ELTTLQSFSP GATDITAQMT TVLDSDPDFV LSWSTGPDGV
TALKALDSLA PDMPRGLNGG TTTTAFEEIA GDLLEGTTAW SYRSQVVDTL PAGPGKDAVQ
AYLDGMEAAG EDTVGGASNA IMAWDAMISA TDAIEAADST DPSEVRDALE IQSFEGAITP
WKRTPDDHAG ALGGYVLVKY DDGQWHPIDE
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