Gene Noca_2146 details

Gene Information

• Locus tag: Noca_2146
• ID: 4599206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 2294361
• End bp: 2296181
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 639776749
• Product: ABC transporter related
• Protein accession: YP_923342
• Protein GI: 119716377
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component; [COG4177] ABC-type branched-chain amino acid transport system, permease component

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGAAT CGACCGTCCG TCATGCGCGG AGCGCAACTC CCGTACTGAT CGCGATCGCA 
GTGTTCGCAC TGCTGGTCGC GTCCCTTGGA GACTCGTACC GAACCGGCAT TCTTTCCCTT 
GCCGTCGTCT ACGGCATTGC ACTAGTTGGA ATGCACGTCC AGATCGGGTA TGCAGGGGAG 
CTCTCGCTCG GTGCCGTCGC CTTCATGGCC GTTGGGGCTT ACGGCAGCGG AGTCCTCACG 
ACTGAGCACG ATATGAACCC CCTCGCCGCA ATCGGTGTGA GCCTTCTGAT CTCGCTCGGC 
GCCGCCCTGA TCATCGGCTC CCTGTGCTTG CGGATCTCCG AGCTCACGCT CGCCCTCGTC 
ACGCTATTCA TGGTGATCAT CGTTGAACAG CTCGTAAGTC ATCTCGATGC CTTCGGCGGC 
ACCTTCGGCA TCAGCGGAAT CGAGCCGCTC GAAGTCTTCG GGTACTCGTT TGAGTCCCGC 
ACGCAGCAAG CAGTCCTGGC CGGAGTCGTT CTGCTCGCCG TGTGGCTGTT CGCCCGATAC 
CGGCTTCGTG CGCTGACCGG CCTGGAGGTC GTGGCATTGA GCCACGATGC GACGATGGCC 
GAATCGCTGG GTGTGGCGGT CCGTCGGCGA CGCCTGGAGG TCTTCGTGTT CGGCGCGTTG 
GTCGCATGCC TTGCTGGTTC TGTGTTTGCG CACACCCGCC TCTACGTGTC CCCTGACCAG 
TTTGGTCCGG GATTAATCTT TGAACTGCTT CTAATGATGT ACATCGGCGG ATTGCGGTTC 
CTTTTGGGCG GATTCCTGGG TGCTTTGATC TTGGGATTCC TGCCAGACAT CGCAATCTCA 
CTGCAGGATT ACCTTCTGAT CATCGAGGGC GTGTTGTTCC TTGCGATCTT TGCGCTGGTA 
CGCGACCGCG GGCTCATCGG ATTCGTTGGG CAAAGCGTCG CGAGAGTTCT TCCCAGCTCG 
GTCCGCGAAG CTCCGCATTC GGTAGTGAAG CAGACCGCAT TGACGGTCCT GCGGCCAACG 
TCGGCAGACG CTTCCCTGTC AGGTGGAGCG TCGCTGAAGA TCACAGGAGC ATCGAAGAGC 
TTTGGCGGCG TTAAGGCCGT GTCTGATGTC GACCTGACGA TCGGCTCCCG GGGCATCCAC 
GCTGTGATCG GCCCGAACGG TGCCGGCAAG ACAAGCCTGT TCAACCTGGT ATCGGGACTG 
AGTAAGCCAG ACGATGGCAG CATCGAGATC TTTGGACAGA ATCACACTTC CAGTGGACCA 
GTAGCGATCG CGCGCGCTGG TCTCGCACGA ACGTTCCAGA CGGTTCGGCT CTCCGAACAA 
CTGACGGTTC TGGACAACGT CGCCGTCGGA AGCGCGCTCG CAAACAACAC GTCATTCTTC 
CGTCTCGGGG ATGGTAAGCA ACTGGGTGCT GCCCGGGCGC GTGCGATGGC GATCCTCAAC 
GAACTTGAGA TTGCCCAGCT GGCGAACCGC ATGCCCAGCG AGTTGTCGCT GGCCGACCAG 
CGTTTCGTTG AACTTGCTCG CGCTCTTTGT CGGGAGCCGA AACTCCTTCT GCTGGATGAG 
CCGGCCTCTG GCCTATCCGA TGAGCAGCGG CGCACCTTGG CGCATACGCT GACGCGGGTT 
GGTCAGAGCC TTCCGATCGT CCTGGTGGAG CATGACATGA ACTTTGTGCG ATCAGTGGCT 
TCCCAGGTCA CGGTTCTCGT AGGAGGTTCG GTGCTTCTGA CTGCATTGAC AGGCGCGGCC 
TTGAGCGATC CGGCTGTCAT CGCGGCGTAC TTGGGTGAGC CGCTAGACCG GGTAGATGGA 
ACGACCGGAG GTCAGGCATG A 

 

Protein sequence

MNESTVRHAR SATPVLIAIA VFALLVASLG DSYRTGILSL AVVYGIALVG MHVQIGYAGE 
LSLGAVAFMA VGAYGSGVLT TEHDMNPLAA IGVSLLISLG AALIIGSLCL RISELTLALV 
TLFMVIIVEQ LVSHLDAFGG TFGISGIEPL EVFGYSFESR TQQAVLAGVV LLAVWLFARY 
RLRALTGLEV VALSHDATMA ESLGVAVRRR RLEVFVFGAL VACLAGSVFA HTRLYVSPDQ 
FGPGLIFELL LMMYIGGLRF LLGGFLGALI LGFLPDIAIS LQDYLLIIEG VLFLAIFALV 
RDRGLIGFVG QSVARVLPSS VREAPHSVVK QTALTVLRPT SADASLSGGA SLKITGASKS 
FGGVKAVSDV DLTIGSRGIH AVIGPNGAGK TSLFNLVSGL SKPDDGSIEI FGQNHTSSGP 
VAIARAGLAR TFQTVRLSEQ LTVLDNVAVG SALANNTSFF RLGDGKQLGA ARARAMAILN 
ELEIAQLANR MPSELSLADQ RFVELARALC REPKLLLLDE PASGLSDEQR RTLAHTLTRV 
GQSLPIVLVE HDMNFVRSVA SQVTVLVGGS VLLTALTGAA LSDPAVIAAY LGEPLDRVDG 
TTGGQA