Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2136 |
Symbol | |
ID | 4599196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2285020 |
End bp | 2285844 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639776739 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_923332 |
Protein GI | 119716367 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCCTG AAGACGCCGA CCTAGATGTT CGGGCCGGCA ATCGACTGCG CGGCAAAACC GTCATCATCA CCGGTGCCGG GCGCGGGATC GGACGGGCAG CCGCCAGGCG CATGGCGACC GAAGGCGCCC AGCTCCTGCT CGCCGACCTC AATGCCGAAA CGCTGGACCA GGTGATCCAA GAGACCTCCG AGATCACCAC GTCGTCAGCC TTCACCGGCG ACCTTATGCA GTACGCGACA GCGGAGAAGT TGATCTCAAC CTGTCTCGAG CGATACGGCC AGGTCGATGT CCTCGTGAAC AACATCGGCG GTGCAACAGC GCTCAAGCCG CTGTGGGACT GGAGCGACGA GGAGATCCTA GCGGAGATGA ACCGCAGCAT CCTTCCGACT GTTTGGTGTT GCCGGGCCGT GCTGCCGACC ATGATTGAAC AGGGGCAGGG CCGGATCGTG AACGTCGGCG CGGAGTCCGT CCGAAACGGG TTGTGGGATC GGGCGCCGTA CAACATGGCC AAGGGAGCTG TCCACGCGCT CACGACGAGC ATCGCTCGCG AGACGGCCGA CAAGGGCATC CTCTGCAATT GTGTCGCGCC TGCGGCGACC GGACGCACCG ACGGCCGGCT AGAGCGCCGA GTCGACCGTA AGCGAAGCCC CGAAGAGCTC GCGCACATCG CGCGAATCAA CGAAATGATG CTCGATTCGA TTCCCTTGGG TCGCCCGGCC TACCCCGAGG AGCAGGCGGC TGCGATCGCA TTCCTTGCCT CTGACGACGC GTCGTTCATT ACCGGCCAGG TTCTGAGCGT CAACGGTGGG TCCTCGATGC TCTGA
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Protein sequence | MRPEDADLDV RAGNRLRGKT VIITGAGRGI GRAAARRMAT EGAQLLLADL NAETLDQVIQ ETSEITTSSA FTGDLMQYAT AEKLISTCLE RYGQVDVLVN NIGGATALKP LWDWSDEEIL AEMNRSILPT VWCCRAVLPT MIEQGQGRIV NVGAESVRNG LWDRAPYNMA KGAVHALTTS IARETADKGI LCNCVAPAAT GRTDGRLERR VDRKRSPEEL AHIARINEMM LDSIPLGRPA YPEEQAAAIA FLASDDASFI TGQVLSVNGG SSML
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