Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2117 |
Symbol | |
ID | 4599961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2262345 |
End bp | 2263613 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639776720 |
Product | sigma-70 region 2 domain-containing protein |
Protein accession | YP_923313 |
Protein GI | 119716348 |
COG category | [K] Transcription |
COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGGGA GCAGTGGAGG GAGCAGCGCA GCGACAGGGG AGGCGATCAC CGCCGCGTGG CGTGCGGAGT CCGCGCGCCT GGTCGGTGCG CTGACCCGGA TGACGCGGGA CCTCGGCCTC GCCGAGGACC TGGCCCAGGA CGCGCTGGTG AGCGCGTTGG AGCAGTGGCC GTCCCGCGGC ATCCCCGCCA ACCCGGCGGC GTGGCTGATG ACCACGGCGA AGCGCCGCGC CGTCGACGGG TTCCGGCGGG CCGAGACCTT GCGCCGCAAG ACCGAGGAGC TCGGTCACGG CCTGAGCGAG GAGGACGCGA TGCCGGACCT CAGCGCGCAG GTGGACTTCA TCGAGGACGA CGTCCTCCGG CTGATCTTCC TGTCCTGCCA CCCACGGCTG ACCCCGGAGT CGCGGGCCGC CCTGACGCTC CGCCTGGTCG GCGGACTGTC GACCGCGGAG ATCGCCCGTG GCTTCCTGGC TGCCGAGTCG GCGATCGGCC AGCGCATCTC GCGCGCCAAG AGGACGCTCA GCGAGGTGCG TGCCGAGTTC GAGCTCCCGG TGGGTGCCGA ACGCACCGCC CGGCTCGAGG ACGTGATGGC CGTCGTCTAC CTGATCTTCA ACGAGGGCTA CACCGCCACG GCGGGCGAGG ACTGGATGCG CCCCGAGCTG ACCGGCGAGG CGATCAGGCT GGCGCGGATG CTGGCCGAGC TGATGCCGGA CGAGCCCGAG GCGCACGGGT TGCAGGCGCT GCTGGAGCTG CAGGCCTCCC GGGGGCCGGC GCGGGTCGAC GCCGAGGGCC GGCCGGTGCT CCTCGACGAC CAGGACCGCA GCAGCTGGGA CGCCCTGCTC ATCCGTCGGG GGCTGGCCGC GCTGGAGCGC GCCGAGGTGC TCGCCCGCGG CGGAGCCCCG GTCGGCCGGT ACTACCTGCA GGCCGCGATC GCGGCGCAGC ACGCCCGGGC GGCGAGCAGC GAGCACACCG ACTGGCGGGC GATCGCGGCG CTGTACGACG TGCTCGCCGA GGCCGCGCCC GGCCCGGTGG TGGAGGTCAA CCGCGCGGTC GCCCACGGGC GGGCCTTCGG TCCGGCCGCC GGGCTCGCCG TACTCGATGG CCTGCCGGAG GGTGCGCTCG CCGGATCGCA CCTGCTGCCC AGCGTGCGTG GCGACCTGCT CGCGCGGGCG GGACGCCACC CCGAGGCGGC TGCATCGTTC CGCGAGGCAG CCTCGCTCAC CCGCAACGAG AGCGAGCGGG CGCTGCTACT GCGCCGGGCA GAGGAGTGA
|
Protein sequence | MAGSSGGSSA ATGEAITAAW RAESARLVGA LTRMTRDLGL AEDLAQDALV SALEQWPSRG IPANPAAWLM TTAKRRAVDG FRRAETLRRK TEELGHGLSE EDAMPDLSAQ VDFIEDDVLR LIFLSCHPRL TPESRAALTL RLVGGLSTAE IARGFLAAES AIGQRISRAK RTLSEVRAEF ELPVGAERTA RLEDVMAVVY LIFNEGYTAT AGEDWMRPEL TGEAIRLARM LAELMPDEPE AHGLQALLEL QASRGPARVD AEGRPVLLDD QDRSSWDALL IRRGLAALER AEVLARGGAP VGRYYLQAAI AAQHARAASS EHTDWRAIAA LYDVLAEAAP GPVVEVNRAV AHGRAFGPAA GLAVLDGLPE GALAGSHLLP SVRGDLLARA GRHPEAAASF REAASLTRNE SERALLLRRA EE
|
| |