| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2114 |
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| Symbol | |
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| ID | 4599958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2259185 |
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| End bp | 2260609 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639776717 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_923310 |
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| Protein GI | 119716345 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0375175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGC GGGGACGACG CGTCGTCGCG GTCGCGTTCT GCGCGGCCCT CGCCGTCACC
ACCGGCTGCG GGCAGAAGGC CGGCGTCGAC CAGATGTACG CCGGCGCCGG GCAACCGGGC
CAGACGGGCT CCGCTGTCGG CCCCGCTGCG GACGGGCTGG GGGGTCCGGG TGCCGGCGGT
GGCGGCTTGG GGCGTGGAGG CGGGTCGGGC TCACTCTCGG GAACGGGCGG CTCCGGATCC
GGCTCGGCCG GGACCGGCAG CCTGTCCGGC CCGGACCCGT CCGGAGGCGC CAGCGCGCCC
GATGGCTCGA GCGCCGCCGG CGGCGACACG ACCGGGGTGA CCGACAGCCT GATCAAGATC
GGGGTGCACG CGCCGGTCAC CGGCGCGGCC GCGATCCCGC AAGCCTCCTT CGAGCGAGCG
GTCGGCGTGT ACTTCGACGC GGTCAACCGC GCCGGCGGCA TCCACGGACG CAAGGTCGAG
GTGCTGTTCG AGGACGACGG CTTCGATCCC AACCGGGCCC GGAGCGAGTG CAAGAAGATG
GCCGAGCAGG AGCAGGTCTT CCTGCTGATC GGCGGTGCGG GCGCGGACCA GATCGACGCG
TGTGCGCGGT ACGCCGCGGC GGCGGGCGTG CCGTACCTCT CGGCGGGCGT CCACGAGACC
CGACCGGGCC TGGGCGCGCT GAGCGACCTC TCGACGTACT TCGCGCTGTC GCTGACCTAC
GAGCAACAGG TCCCCCTGCT GGCCAACCTG GTGGGCTCGG AGTTCGACGG CGACCGGGTC
GCCCTGATCG TGGCCGACAA CGACAGCCTC GACAACTTCT ACGCGCACGC CGAGGCCGCC
GTCGGCGACG TCGCCGGCGA CGACCTGGTG CTGGCGCGGC GGATCCCCAA GAACACGACG
TCGGACGCCC CTGCGATCGG GACCGCCATC TGCCAGAGCG GCGCGACCGC CGTCGTCTGG
AACGCCAGTC CGAGCTCGCT GCTCAACGTC GCCAAGTCGA TGCCGTGCCG GGTCACCTTC
CTGGGGCCCG GACTGACCAA CGGCCTCAAC ATCGTGACCC AGGTCGGCTG CCCGAACGTC
GACGGCGCGC TGTTCTACTC ACCGTTCCCG GGCATGGACG TGATGCGCCA GGACGCGGCG
TTCGTGAAGG CCTACCGCGC CAAGAACGAC AACGCCAACC CCGACGACAT CGGGGCCGCG
ATCTACGGCG TGGAGAAGCT CGTCGGCGCG ATGCTGGACG CCACCGGCAA GGACCTCAGC
CGCGAGTCGT TCATGGCGAC CATCGCCCGG GTGAAGACCT TCCAGACCGG CGTCTACCCG
CCGACCCGGT TCACCAGCAG GTTCGGCGGC ACGGCGATGA ACCTGCTCCA GGCCGACTGC
GGTCGCAGCG AGTACGTGAC GGTGCGGAGG AACGAGCAGC CATGA
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| Protein sequence | MSARGRRVVA VAFCAALAVT TGCGQKAGVD QMYAGAGQPG QTGSAVGPAA DGLGGPGAGG
GGLGRGGGSG SLSGTGGSGS GSAGTGSLSG PDPSGGASAP DGSSAAGGDT TGVTDSLIKI
GVHAPVTGAA AIPQASFERA VGVYFDAVNR AGGIHGRKVE VLFEDDGFDP NRARSECKKM
AEQEQVFLLI GGAGADQIDA CARYAAAAGV PYLSAGVHET RPGLGALSDL STYFALSLTY
EQQVPLLANL VGSEFDGDRV ALIVADNDSL DNFYAHAEAA VGDVAGDDLV LARRIPKNTT
SDAPAIGTAI CQSGATAVVW NASPSSLLNV AKSMPCRVTF LGPGLTNGLN IVTQVGCPNV
DGALFYSPFP GMDVMRQDAA FVKAYRAKND NANPDDIGAA IYGVEKLVGA MLDATGKDLS
RESFMATIAR VKTFQTGVYP PTRFTSRFGG TAMNLLQADC GRSEYVTVRR NEQP
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