| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2090 |
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| Symbol | |
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| ID | 4595535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2233631 |
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| End bp | 2234194 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639776693 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_923286 |
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| Protein GI | 119716321 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATCC CGCCCGGGCC CGACGAGGCC GCCCGTCGGC GAGCCTTCCG CGACTTCGTG
GAGCCCGAGA TCGAGTTGAT GCTGCGCGTC GCGCGAAGCA TGACGTCCGG GGACGCCGAT
GCCGAGGACC TGGTGCAGGA GTCACTCCTG CGGGCGTACC GCGGGCTGCA CCGCTTCGAC
GGCAGCCACC CCCGCGCCTG GCTGCTCACC ATCCTGCGCA ACACGAACGC CAACCTGCAC
CGACGGCGGC GGCCGATCAC CATCGACGAC GCCCAGCTCC ATGCGGCGTC GCGCCCCGCG
TTCGGGCACT CCGAGCTGCC GAGTGCCGAG CAGTCCTTCT TGGACGAGGA GCTCGACGAG
AAGCTTCACA ACGCGATCGC CGCACTCGAC CCGCGATTCC GGGCCGCCCT GATCCTGGTC
GACCTGCACG ATCTCAGCTA TGCCGAGGCC GCCGCAGTAC TCGATGTCCC CGTCGGGACG
GTGATGTCCC GACTGAGCCG CGCCCGCGAT CGGCTGCGGC GGAGTCTCGG CCCCACCACC
CTGTCCCGAG GAGGGCTGTC ATGA
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| Protein sequence | MSIPPGPDEA ARRRAFRDFV EPEIELMLRV ARSMTSGDAD AEDLVQESLL RAYRGLHRFD
GSHPRAWLLT ILRNTNANLH RRRRPITIDD AQLHAASRPA FGHSELPSAE QSFLDEELDE
KLHNAIAALD PRFRAALILV DLHDLSYAEA AAVLDVPVGT VMSRLSRARD RLRRSLGPTT
LSRGGLS
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