Gene Noca_2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2072 
Symbol 
ID4595826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp2217186 
End bp2217863 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content74% 
IMG OID639776675 
Productintegral membrane protein 
Protein accessionYP_923268 
Protein GI119716303 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.721344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAGGG GCGTTTGGCT GCGCCTCGGG CTGCTCGTCA GCCTGATCGG GCTGCTGGCG 
GCGGCGACAC TCCTGACCGA CGCGCCGACC ATGAGCCAGA TCCATGATTG GACGGATGCG 
GCCGGTTGGG CGGGGGTGTT CGTCTTCGTG CTGGTCTACG TCGTCTTCGC GCTGATCCCG 
GTCCCGAAGG CGGTGCTCAC CTTGGCCGCG GGGGCTCTCT ACGGTGTGCC CCTGGGCGCC 
GCCCTCGCCC TGGTCGGCGC GACCACGGGG GCAGGCGTGG CCTTCGGCGC GGCTCGGCTC 
CTGGGCCGGG ACGCGGTGAC TCGGCTCGAG GGACGACGGC TGGCCTGGCT CGACGACGTG 
CTCGCGCGCC GCGGCTTCCT GGCGGTCCTG GGGCTGCGGC TGGTGCCGCT GGTGCCCTAC 
ACCGTCCTGA ACTACGGCGC GGGCGTGACC GGGGTCCGCT GGCGGTCCTA CCTGCTCGCC 
ACGATCCTCG GCATGAGCCC CGGCGCGACG CTCTACGCGA CCCTGGGCGC ACATAGCGAC 
GAGCCCGCGT CCTGGCCGTT CGTCCTGGCG GGCGCGGGGC TGGCGGTGCT CTCCGTGCTC 
ACCGCTGGGG TGGCCTGGTG GCGGCCACGG AGGGGAACGA CGAGTGGAGC CGCCGTCGCT 
CCGGCGGACC GCGAGTGA
 
Protein sequence
MSRGVWLRLG LLVSLIGLLA AATLLTDAPT MSQIHDWTDA AGWAGVFVFV LVYVVFALIP 
VPKAVLTLAA GALYGVPLGA ALALVGATTG AGVAFGAARL LGRDAVTRLE GRRLAWLDDV 
LARRGFLAVL GLRLVPLVPY TVLNYGAGVT GVRWRSYLLA TILGMSPGAT LYATLGAHSD 
EPASWPFVLA GAGLAVLSVL TAGVAWWRPR RGTTSGAAVA PADRE