| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2048 |
|---|
| Symbol | |
|---|
| ID | 4595802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2192434 |
|---|
| End bp | 2195421 |
|---|
| Gene Length | 2988 bp |
|---|
| Protein Length | 995 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 639776651 |
|---|
| Product | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase |
|---|
| Protein accession | YP_923244 |
|---|
| Protein GI | 119716279 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGC CGGCGACCAG CAAGGGGAGC CTGCTGCGCC TGGGCTTCCA GGACCCCGAC
GCCGTCCTCG AGGAGCTCGC CGCCCTCGGC TCGGCCGCGG ACCCGCTGCT CGCCCTCATC
GCCCGGACGG CCGACCCGGA CGAGGCCGTC GCCGCGCTGA CCCGGCTGGT CCAGGCGCTC
GACGACCCCG ACGAGCTGCT CGACGAGCTG GTCGAGGACG AGGGCACCGC GATGCGGCTG
CTCAGCGTGC TCGGCGCCAG CGAGGCGCTG GTCGACCACC TGGTCCGACA CCCCGGGCAC
TGGCGCGAGC TGGCCGACCC GGCGCTCGGC TCGAGCCGGC CCGCTGCCTG GGCGGTCCGC
GCCGGGCTGC TCGCGGCCGT CGGCGCCGAC CCCGGCGACC CGGAGCCGGT CGCGACCGTG
CCGGACGCCG CGGCCGTCGA CGCGCTACGC GTGGAGTACC GCCGGGTGCT GCTGCGCCTG
GCCGCGCGCG ACCTGTCCCA CCACCTCGCC GTCGACGACG CCGCCGCCGA GCTCTCCGAC
CTCGCGGCCG GCACCCTCGA CGCCGCCCTC GCCGTGGCCC GCCAGCGGGT GGGCGAGGAC
GCCGCGCTGG CGCGGCTCGC CGTGATCGCG ATGGGCAAGT GCGGCGGCCA CGAGCTCAAC
TACGTCTCCG ACGTCGACGT GATCTTCGCC TGGGCGCCGG CCGACGGCGT GCCCGACAGC
GCCGTCGACA ACGGTGCGCT CCGGGCCGCC ACCCAGCTGG CCAGCCACCT GATCCGGATC
TGCTCCGACC ACACCACCGA GGGCACCATC TGGCCGGTCG ACGCGGCGCT GCGGCCCGAG
GGCAAGGCCG GGCCGCTGGT GCGCACCATC GCCAGCCACC AGGGCTACTA CGAGCGGTGG
GCCAGCACCT GGGAGTTCCA GGCCCTGCTC AAGGCGAGGG CCGTCGCCGG CGACCTGGCG
CTGGGCCGCG AGTTCGTCGA GATGACCCGG CCGCTGGTGT GGAGCGCCGC CGAGCGCGAC
GGCTTCGTGG AGGACACCCA GGCGATGCGC CGCCGGGTCG TGGACCACAT CCCGGCCAAG
GAGGCCGAGC GCCAGCTCAA GCTGGGCTCC GGCGGGCTGC GCGACGTCGA GTTCGCGGTC
CAGCTGCTGC AGCTCGTGCA CGGCCGGGCC GACGAGCGGA TCCGGCCGTC CACCACGCTC
AGCGCGCTCG CCGAGCTCAC TCGCGGCGGG TACGTCGGCC GCCCGGACGG TGAGGCCCTG
CACGAGGCGT ACGCGTTCCT CCGGACCCTC GAGCACCGCA TCCAGCTGCA CCGGCTGCGC
CGTACCCATG TGGTGCCGGA GGACGAGCCC TCGCTGCGGC GGCTCGGGCG CAGCATGGGC
TACCTGAAGG ACCCGGTCCG GGTCCTCGAC AAGACCTGGC AGCACCACCG CCGCGAGGTG
CGGCGGCTGC ACGAGAAGCT CTTCTACCGT CCGCTGCTCA CCGCCGTCGC GAAGATCCCC
GGCGACGAGG CGCGGCTCTC GCCGGAGGCG GCGACCAAGC GGCTGGGCGC GCTCGGCTTC
CTCGACCCGC AGGCCGCGCT GCGCCACCTC GAGGCGCTGA CGTCGGGGGT CAGCCGGGCC
GCGCAGATCC AGCGGACGCT GCTGCCGGTG CTGCTCGGCT GGTTCGCCGA CGCCCCCGAC
CCGGACGCGG GCCTGTTCGG GTTCCGCCGG ATCAGCGAGT CGCTCGGCAG CACGCCGTGG
TACCTCTCCA CCCTGCGCGA CGAGGGCGAG GTGGCCGAAC GGCTGGCCCG GGTCCTCGCG
ACCTCCCGCT ACGCCACCGA CCTGCTCGAG CGCGAGCCGC AGGGCGTGCG GATGCTGGGC
GGCGACCTGC GGCCGCTGTC GGCGGAGGCG CTGACCGAGG AGATGCTCGC GTCCTCGGGG
CGGCACGACG AGGCGGAGTC GGCGGTGCTC GCGATCCGTG GGGTGCGTCG GCGCGAGCTG
CTGCGGATCG CGGCCGGCGA CCTGCTCGGG CTCACCGACG TCGCCGAGGT CGGCGCCGGC
CTGTCGCGGC TGACCGACGC GACCCTCGAG GGGACGCTCG AGGTCGCGGG CCGCGCCGTA
CGCCGGCAGC GGGACCTGGC CGCGGCCCCG ACCCGGATGG CGATCGTCGC CATGGGTCGC
TACGGCGGCT TCGAGCTGTC CTACGGCAGC GACGCCGACG TGCTGTTCGT GCACGACCCG
GACCCCGGGG CCGACCCGCA GCAGGCGTCG TCGTACGCCC ACGCGGTCGC CAACGAGCTG
CGCCGCCTGC TCGCGCTGCC CGGCCCGGAC CCGGCCCTGG AGGTCGACGC CGACCTGCGC
CCGGAGGGCA AGCAGGGTCC GCTGGTGCGC ACCCTCGACT CCTACGCGGC CTACTACGCG
CGCTGGTCGA AGGTCTGGGA GGCGCAGGCG CTGCTGCGCG CCGACGCCGT GGTCGGCGAC
CTCGACGTGC GCCGACGGTT CGAGGAGCTG ATCGATCCGC TGCGCTACCC GGCCGGCGGG
CTCAGCGAGG ACGACGTGGT CGAGGTGCGC CGGATCAAGG CGCGCGTCGA CGAGGAGCGG
CTGCCGCGCG GCGCCGACCC GCACACCCAC CTCAAGCTCG GCCGCGGCGG GCTCGCGGAC
ATCGAGTGGA CCGTGCAGCT GCTGCAGATG CGGTACGCCG ACTCGGTGCC CGGCCTACGC
ACCTCCCGGA CCCTCGACGC GCTGGCGGCG GCCCGCGAGG CCGGCCTGGT CACCGACGAC
GACGCCGCCG TGCTCCAGCA GACCTGGCGC CGGGTCAGCC GGGTCCGCAA CGCCGTGACG
CTGGTGCGCG GCCGGGCCGC CGACGAGCTG CCCCGCGACA TCCGCGAGCG AGCGGCGGTG
GCCTCGATCC TCGGCTACCC GGCCGGGTCC TCGGACGCGA TGGTCAACGA CCAGCTGCGC
TACACGCGCC TGGCCCGCGG CGTCGTGGAG CGGGTGTTCT GGGAGTGA
|
|---|
| Protein sequence | MIRPATSKGS LLRLGFQDPD AVLEELAALG SAADPLLALI ARTADPDEAV AALTRLVQAL
DDPDELLDEL VEDEGTAMRL LSVLGASEAL VDHLVRHPGH WRELADPALG SSRPAAWAVR
AGLLAAVGAD PGDPEPVATV PDAAAVDALR VEYRRVLLRL AARDLSHHLA VDDAAAELSD
LAAGTLDAAL AVARQRVGED AALARLAVIA MGKCGGHELN YVSDVDVIFA WAPADGVPDS
AVDNGALRAA TQLASHLIRI CSDHTTEGTI WPVDAALRPE GKAGPLVRTI ASHQGYYERW
ASTWEFQALL KARAVAGDLA LGREFVEMTR PLVWSAAERD GFVEDTQAMR RRVVDHIPAK
EAERQLKLGS GGLRDVEFAV QLLQLVHGRA DERIRPSTTL SALAELTRGG YVGRPDGEAL
HEAYAFLRTL EHRIQLHRLR RTHVVPEDEP SLRRLGRSMG YLKDPVRVLD KTWQHHRREV
RRLHEKLFYR PLLTAVAKIP GDEARLSPEA ATKRLGALGF LDPQAALRHL EALTSGVSRA
AQIQRTLLPV LLGWFADAPD PDAGLFGFRR ISESLGSTPW YLSTLRDEGE VAERLARVLA
TSRYATDLLE REPQGVRMLG GDLRPLSAEA LTEEMLASSG RHDEAESAVL AIRGVRRREL
LRIAAGDLLG LTDVAEVGAG LSRLTDATLE GTLEVAGRAV RRQRDLAAAP TRMAIVAMGR
YGGFELSYGS DADVLFVHDP DPGADPQQAS SYAHAVANEL RRLLALPGPD PALEVDADLR
PEGKQGPLVR TLDSYAAYYA RWSKVWEAQA LLRADAVVGD LDVRRRFEEL IDPLRYPAGG
LSEDDVVEVR RIKARVDEER LPRGADPHTH LKLGRGGLAD IEWTVQLLQM RYADSVPGLR
TSRTLDALAA AREAGLVTDD DAAVLQQTWR RVSRVRNAVT LVRGRAADEL PRDIRERAAV
ASILGYPAGS SDAMVNDQLR YTRLARGVVE RVFWE
|
|---|
| |