Gene Noca_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2038 
Symbol 
ID4598661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2181044 
End bp2181871 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content72% 
IMG OID639776641 
Productmethionine aminopeptidase, type I 
Protein accessionYP_923234 
Protein GI119716269 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.138159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCCCC CGCTGCGCTC GGTGCCCGCC TCGATCCCCC GACCGGAGTA CGTCGGCAAG 
GACGCGCCCA CGCCGTTCAG CGGCGCCGAG GTCAAGGACG CGGAGACCGT GGAGCGGATG
CGGGCCGCCG GCCGGCTGGC CGCCCGGGCC CGCGACCTGG TCGGGTCGCA CGTCGCGCCT
GGGGTGACCA CCGACGAGCT GGACCGGGTC GGCCACGAGT TCCTGTGCGA CCACGGCGCC
TACCCCTCGA CGCTGGGCTA CCGCGGGTTC CCCAAGTCGC TGTGCGCCAG CGTCAACGAG
GTCGTCTGCC ACGGCATCCC CGACGACCGG ATGGTCGAGG ACGGCGACAT CGTCAACATC
GACGTCACCG CCTACCTCGA CGGCGTGCAC GGCGACACCA ACGCCACGTT CCTCGCCGGG
GACGTCGACG AGGAGTCGCG GCTGCTGGTC GAGCGCACCC GCGAGGCGTT GGACCGCGGC
ATCAAGGCGG TCCGGCCGGG CCGGCGGATC AACGTGATCG GCCGGGTGAT CGAGTCCTAC
GCGGCACGCT TCGGGTACGG CGTGGTCCGC GAGTTCACCG GCCACGGCAT CGGCAGCTCG
TTCCACAGCG GGCTCGTGGT GCCGCACTAC GACGACCCGG CGTACGACAC CGTGATCGAG
GTGGGCATGA CGTTCACCAT CGAGCCGATG CTCAACCTGG GCACCCACGA GTGGGACCTC
GCCGAGGACG GCTGGACGGT GCTCACCCGC GACCGGCGCC GCAGCGCCCA GTTCGAGCAC
ACCCTGCTGG TCACCCCCAC CGGCGCCGAG GTGCTGACGC TGCCCTGA
 
Protein sequence
MTPPLRSVPA SIPRPEYVGK DAPTPFSGAE VKDAETVERM RAAGRLAARA RDLVGSHVAP 
GVTTDELDRV GHEFLCDHGA YPSTLGYRGF PKSLCASVNE VVCHGIPDDR MVEDGDIVNI
DVTAYLDGVH GDTNATFLAG DVDEESRLLV ERTREALDRG IKAVRPGRRI NVIGRVIESY
AARFGYGVVR EFTGHGIGSS FHSGLVVPHY DDPAYDTVIE VGMTFTIEPM LNLGTHEWDL
AEDGWTVLTR DRRRSAQFEH TLLVTPTGAE VLTLP