Gene Noca_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2013 
Symbol 
ID4598635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2155598 
End bp2156731 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content77% 
IMG OID639776617 
Producthypothetical protein 
Protein accessionYP_923210 
Protein GI119716245 
COG category[S] Function unknown 
COG ID[COG3323] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.124677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCGC TCGAGGACGT CGTCGACCTG CTGCACGGGT GGTACCCACC CCACACCGCC 
GACTCGTGGG ACGCCGTCGG GCTCGTGTAC GGCGACCCCG CGGCGCCGGT GCGCAAGATC
CTGTTCGCGG TCGACCCGGT GCTGCCGGTG GCCCAGGAGG CAGCCGAGTG GGGCGCCGAC
CTGCTGGTCA CCCACCACCC GCTGTTCCTC AAGGCCGTGC ACGGATTCCC CGCCACGACC
CCCAAGGGCC GCACCCTGGC CGCCCTCGCC GGCGCCGGCT GCGCCCTGCT CGCGGCCCAC
ACCAACGCCG ACCAAGCCGT CGGCGGCGTC TCCGAGGCGC TGGCCAGGAC CCTGGGCCTG
AGCGACCCCG AGCCGATCGT GCCGGCGTCC GCCGGCCTGC TCGACAAGCT CACCGTGTAC
GTGCCCGCGG CCGACGCCGA CCGGCTCCGC GAGGTGCTGG CGCAGGCGGG AGCGGGGCGG
ATCGGCGACT ACGACCACGC CTCGTTCTCG AGCCCGGGCG AGGGCCGGTT CCGACCGCTG
GAGGGCGCCC ACCCCGCGAT CGGGTCGGTC GGCGAGGTCG AGGTGGTCGA CGAGGTCCGC
GTCGAGGTCG TCGTCCCGCG GGACCGCCGA GCCGCGGTGG TGCGCGCGCT GCTCACGGCC
CACCCCTACG AGGAGCCGGC GTACGACGTC GTCGAGCTGG CCGACCCCGG CCTCGCGACG
ACCGGCACCG GGCGGATCGG CACCGTGCCG GAGACGACCC TGGAGGGGTT CGCCGCCCAC
GTGGCCGGCG CGCTGCCGGC CACCGCCCAG GGAGTACGCG TCGCCGGCGA CCCGCAGCGG
CCGGTGCGCC GGGTGGCGCT GTGCGGCGGC GCAGGGGACT TCCTGCTCGA CGCGGTGGCG
CGCACCGACG CCGACGTGTA CGTGACCAGC GACCTGCGGC ACCACCCTGC CAGCGAGTTC
GCCGAGCGCG GCGGGCCGGC GCTGGTCGAC GTCGCCCACT GGGCGGCGGA GTGGACCTGG
CTGCCGGTGG TGGCGGCGCG GGTGGCCGAG GCGCTGGTGG CCGAGGGGAC GGGCGATACG
GTGGAGACCC GCGTCAGCAC CATCCGGACC GACCCCTGGC GGTTCCGGGT CTGA
 
Protein sequence
MPALEDVVDL LHGWYPPHTA DSWDAVGLVY GDPAAPVRKI LFAVDPVLPV AQEAAEWGAD 
LLVTHHPLFL KAVHGFPATT PKGRTLAALA GAGCALLAAH TNADQAVGGV SEALARTLGL
SDPEPIVPAS AGLLDKLTVY VPAADADRLR EVLAQAGAGR IGDYDHASFS SPGEGRFRPL
EGAHPAIGSV GEVEVVDEVR VEVVVPRDRR AAVVRALLTA HPYEEPAYDV VELADPGLAT
TGTGRIGTVP ETTLEGFAAH VAGALPATAQ GVRVAGDPQR PVRRVALCGG AGDFLLDAVA
RTDADVYVTS DLRHHPASEF AERGGPALVD VAHWAAEWTW LPVVAARVAE ALVAEGTGDT
VETRVSTIRT DPWRFRV