| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1991 |
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| Symbol | |
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| ID | 4598306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2128165 |
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| End bp | 2129376 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639776594 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_923188 |
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| Protein GI | 119716223 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.540017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCCAG GGCAGGGCGC CGGCCCGCAC CGCCGGGCCG CCGACGCGCT CCAGCGCGCG
ACCGGGGCGC TGAGCACCGC CGCCATGGCC CGCATGGAGC AGGACATGCC ATGGTTCCGC
GACCTGAGCG CCGAGGACCG CTCCTGGGTC GGCATGATCG TCCAGGCCGG TATCCGCGGC
TTCGTCGACT GGTACCGCCA GGCCGTGGAC CAGCCCGCGC CCGGCTCCAC CGAGATGGTC
GCCTCCGTCT TCGGCGCCGC CCCGCGCGCC CTCGCGGGCG TGATCAACCT CCAGCAGACC
GTCGACCTGG TGCGGCTCTC GATCGAGGTC GTGGAGTCGA ACGTCGAGCA GCTGCTCGAC
CCGGCCGACG CGGCCGACGT GCGGGCGGCG GTGCTCCGCT ACGCCCGCGA GGTGGCCTTC
GCGACCGCCG AGGTCTACGC GCGGGCCGCG GAGGTGCGCG GCGCCTGGGA CGCCCGGCTG
GAGGCCCTGG TCGTCGACGC CGTGCTCCGT TCGGAGGCCG ACGAGGCGCT GCTCTCCCGC
GCCAGCGCCC TGGGCTGGGC GGCCCGCGGG GACGTGGCGG TGGTCCTCGG CAGCGTGCCC
GGTGCGCGCA GCGAGTCCGA CACGTTCGAC GAGGTACGCC GGGTGGCCCG GGCGGCCGGG
ATGGACGCCC TGTGCGCGGT GCAGGGTGAC CGGCTGGTCG TCCTGCTCGG CGGCGTCGGC
GAGCCGCGGG CGGCCGCCGA GGCGGTCAGC GACCTGTTCG GCGAGGGGCC CGTGGTCGTC
GGCCCGGTCG CGGCCGACCT CGCGCAGGCC CACGTCTCGG CCCGGGCGGC CCTGTCCGCC
CACCGCGCCG CGCCCGGCTG GCCCGAGGCG CCGCGTCCGG TGCGCAGCGC CGACCTGCTC
CCCGAACGGG TGCTCGCCGG CGACGGCCAC GCGCGCCGGC ACCTGGTCGA CGAGGTGTAC
CTGCCGTTGG TCCGGGCCCG CGGCACCCTG ATCGAGACCA TCGGCGCCTA CTACCAGCAC
GGCTCCTCGA TCGAGGCCAC CGCGCGCGCC CTGTTCGTCC ACCCGAACAC GGTGCGCTAC
CGGCTGCGCC AGGTCGCCGA GCTCACCGGC CTCGCCCCCG GCCGGGCGCG GGACGCCTTC
ACCCTGGAGA TCGCCCTCGT GCTCGGCCGC CAGTCCGGCC GCAGCGCCCG CACACCTGAG
GCGTCTTTGT AG
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| Protein sequence | MNPGQGAGPH RRAADALQRA TGALSTAAMA RMEQDMPWFR DLSAEDRSWV GMIVQAGIRG
FVDWYRQAVD QPAPGSTEMV ASVFGAAPRA LAGVINLQQT VDLVRLSIEV VESNVEQLLD
PADAADVRAA VLRYAREVAF ATAEVYARAA EVRGAWDARL EALVVDAVLR SEADEALLSR
ASALGWAARG DVAVVLGSVP GARSESDTFD EVRRVARAAG MDALCAVQGD RLVVLLGGVG
EPRAAAEAVS DLFGEGPVVV GPVAADLAQA HVSARAALSA HRAAPGWPEA PRPVRSADLL
PERVLAGDGH ARRHLVDEVY LPLVRARGTL IETIGAYYQH GSSIEATARA LFVHPNTVRY
RLRQVAELTG LAPGRARDAF TLEIALVLGR QSGRSARTPE ASL
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