Gene Noca_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1990 
Symbol 
ID4598305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2126887 
End bp2128086 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content75% 
IMG OID639776593 
Product(Acyl-carrier-protein) S-malonyltransferase 
Protein accessionYP_923187 
Protein GI119716222 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGTCA TCGTCGCTCC CGGCCAGGGT GCCCAGTCCC CCGGCTTCCT CCGGCCGTGG 
CTCGAGGACC CGACGTTCGC CTCCCGGTTC GCCTGGCTCT CGACCGTCGC GGGCCTCGAC
CTGGCCCACT ACGGCACCGA GGCCGACGCG GAGACGATCC GCGCGACCGA GATCGCCCAG
CCGCTGCTCG TCGCGACCGG CCTCGTGGCG GCCCTGGAGC TGTTCCCGAG CCCGGCCGAC
GCCTTCGAGC AGGTCGGCGC CGTTGCGGGC CACAGCGTGG GCGAGATCGC GGCGGCGGCG
GGCGCCCGGG TGATCACCGC CGAGCAGGCC ATGGTCCTGG TCCGCGAACG CGGCAACGCG
ATGGCGCGGG CGGCCGCGGC GACCCCGACC GGCATGACCG CCGTCCTTGG TGGCGACCGG
GACGAGGTCC TCGCGGCCCT GGCCGAGCAC GGCCTGACCC CGGCGAACGA CAACGCTGCC
GGCCAGCTGG TCGCCGCCGG CACCCTCGAG CAGCTCGAGG CCCTCGCCGC GCACCCGCCG
GCGAAGGCCC GGTTGATGCC GCTGAGCGTC GCCGGCGCCT TCCACACCCA CCACATGGAG
CCCGCGGTCG GCCACCTGGC CGCGCTGGCC CGCTCGGTCT CGGTGCACGA CCCGCGCACC
CGGGTGATCT CCAACCGCGA CGGCCGGGTC GTCCACGACG GCCGCGACGT GCTGGCCCGG
ATCGTCGGCC AGATCGCCAG CCCGGTGCGT TGGGACCTGT GCCTGGAGAC CATGGAGGAC
CTCGGCGTGA CCGGCATCCT CGAGATGCCG CCGGCCGGGA CGCTGACCGG GATCGCACGG
CGCCGATTTT CGGGGAGTGC CCTGCGCGGG GTCGAGACGT TCGCGCTCAA GACTCCTGAC
CAGCTCGACG ACGCCCGCGC GTTCTGCGCC AAGCACGGCG AGTCCTCCGG CCTCGGCATC
AGCCCGACCT GGCGGATGGT GGTCTCACCC GCCAAGGGCA CCTTCCACCA GGACGGCGCC
GCCGCCGGCA CCGACGTGCT CGTGCCGGGC GCGGCCATCG GCGAGGTCGC CAGCCTGCGC
GACCGCAGCC GGATCACCGC GGCGCACGGC GGCACCGTCG TCGAGTGGCT CGTCGAGGAC
GGCGACCTGG TCTCGCCGGG CCAACCACTG CTGCGTCTGC ACCCCGAGGG AGGAGCCTGA
 
Protein sequence
MLVIVAPGQG AQSPGFLRPW LEDPTFASRF AWLSTVAGLD LAHYGTEADA ETIRATEIAQ 
PLLVATGLVA ALELFPSPAD AFEQVGAVAG HSVGEIAAAA GARVITAEQA MVLVRERGNA
MARAAAATPT GMTAVLGGDR DEVLAALAEH GLTPANDNAA GQLVAAGTLE QLEALAAHPP
AKARLMPLSV AGAFHTHHME PAVGHLAALA RSVSVHDPRT RVISNRDGRV VHDGRDVLAR
IVGQIASPVR WDLCLETMED LGVTGILEMP PAGTLTGIAR RRFSGSALRG VETFALKTPD
QLDDARAFCA KHGESSGLGI SPTWRMVVSP AKGTFHQDGA AAGTDVLVPG AAIGEVASLR
DRSRITAAHG GTVVEWLVED GDLVSPGQPL LRLHPEGGA