| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1986 |
|---|
| Symbol | |
|---|
| ID | 4598301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 2122871 |
|---|
| End bp | 2124301 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639776589 |
|---|
| Product | propionyl-CoA carboxylase |
|---|
| Protein accession | YP_923183 |
|---|
| Protein GI | 119716218 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.176304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGCCA CTGCCACCAA GCCGGCGAAG CTCCCCCGCG AGGAGGACCC GCGCAACCCG
GTGCACCGGC TCACGGCCCT CCTCGACGAG GGCACGCTGG AGCTGATCAC CCCCGACGAC
GACTCGGGGA TGCTCGCCGC CGTCGGCCAG GTCGACGGCA CCCGGGTGGT GGCGTTCTGC
TCGGACGCCA CGGTGATGGG CGGCGCGATG GGCGACCTCG GCTGCCGCGT GGTCGTCGAC
GCCTACCACC GGGCGATGAC CGACCGGATC CCGGTCATCG GCCTATGGCA CTCCGGCGGC
GCCCGGCTCG CCGAGGGCGT GCTCTCCCTG CACGCGGTCG GCCGGATCTT CCAGGTGATG
ACCCAGGCCT CCGGACGGAT CCCGCAGATC TCGGTGGTGC TCGGTCCGGC CGCCGGCGGC
GCGGCGTACG GCCCGGCCCT CACCGACGTC GTCATCCTCG GCCCCGAGGG CCGGATCTTC
GTGACCGGGC CCGACGTGGT CCGATCCGTG ACCGGTGAGG ACGTCGACAT GCTGCGGCTC
GGGGGTCCCG AGCCCCACGG CCGGCGCTCC GGAGTGGTCC ACATCCTCGC GGACACCGAG
CGCGACGCAC TCGACCGCGC CCGCGACGTC GCCGGGCTGC TCGGCTCGCA GGGCTCGCTG
GTCGTCGAGG ACGTCGAGGA CCGCGACCTG GCCGCGCTGC TCCCGGAGTC GAAGAAGCGC
GCGTACGACG TGCACCCCCT GGTCGAGTCG ATCCTCGACG AGGGCACCGC CCAGGAGCTG
CACGCCAGGT GGGCACCCAA CATCGTGACC GCACTCGGCC GGCTCGGTGG CCGCACCGTC
GGCGTGGTCG CGAACAACCC GCTGCGGCTG GGCGGCTGCC TCGACTCGCT CTCCGCCGAG
AAGGCCTCCC GCTTCGTGCG GATGTGCGAC GCGTTCGGCG TCCCGCTCGT GGTGGTCGTC
GACGTGCCCG GCTACCTGCC CGGGGTCGGG CAGGAGTGGG ACGGCGTGGT CCGCCGCGGC
GCGAAGCTCC TGCACGCGTT CGGAGAGTGC GTGGTCCCCC GGGTCACCCT GGTGACCCGC
AAGACCTACG GCGGCGCGTA CATCGCGATG AACGCCCGCT CCCTGGGCGC GACGAAGGTC
TTCGCGTGGC CCGGCGCAGA GGTGGCCGTG ATGGGCGCGG TCGCGGCGAT CCGGATCCTG
CACCGGCGCC GGCTGGCCGA GGTCGCCCCG GACATCCGTC CCCAGGTCGA GGCCGAGCTG
GCGGCCGAGC ACGAGCGGAT CGCCGGCGGG GTCGACAAGG CGGTCGAGAT CGGCGTGGTC
GACGAGGTCG TCGAGCCGGC CGTGACCCGG AGCGCCCTCG CCCGGGCGAT CGACGACGCC
GTGCAGGCCG ACGGCGTCCG CCGCGGCGCC CACGGGAACA TCCCGCTCTG A
|
|---|
| Protein sequence | MTATATKPAK LPREEDPRNP VHRLTALLDE GTLELITPDD DSGMLAAVGQ VDGTRVVAFC
SDATVMGGAM GDLGCRVVVD AYHRAMTDRI PVIGLWHSGG ARLAEGVLSL HAVGRIFQVM
TQASGRIPQI SVVLGPAAGG AAYGPALTDV VILGPEGRIF VTGPDVVRSV TGEDVDMLRL
GGPEPHGRRS GVVHILADTE RDALDRARDV AGLLGSQGSL VVEDVEDRDL AALLPESKKR
AYDVHPLVES ILDEGTAQEL HARWAPNIVT ALGRLGGRTV GVVANNPLRL GGCLDSLSAE
KASRFVRMCD AFGVPLVVVV DVPGYLPGVG QEWDGVVRRG AKLLHAFGEC VVPRVTLVTR
KTYGGAYIAM NARSLGATKV FAWPGAEVAV MGAVAAIRIL HRRRLAEVAP DIRPQVEAEL
AAEHERIAGG VDKAVEIGVV DEVVEPAVTR SALARAIDDA VQADGVRRGA HGNIPL
|
|---|
| |