| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1947 |
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| Symbol | |
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| ID | 4599852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2077725 |
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| End bp | 2080523 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639776545 |
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| Product | DNA primase |
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| Protein accession | YP_923144 |
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| Protein GI | 119716179 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core
[TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.825575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGGGC GGATCCGTGA TGAAGACATC GCCGAGGTGC GCGAGAAGGC ACGCATCGAC
GACGTCGTCT CGCAGTACGT GACGCTGCGC CCGGCCGGCG GCGGCTCGCT CAAGGGGCTC
TGCCCGTTCC ACGACGAGAA GTCCCCGTCG TTCAACGTCA ACCCGAGTCG CGGGTTCTTC
CATTGCCTGG CCGGCGAGAC CAAGGTCTTG ACCTGGGACG GGCCGCGGCC GATCAGCGAG
CTTGCCGGTG GCACCCACCG GATCCTCAAC GTGCACGGCG ACTGGGCAGA AGCGCCCTTG
AAGTCCTACG GCGTGCAGCG GCTGTGGCGG ATCGTCGTCA CGCGGAACCG TGAGCGCAAA
GAGCTCTTTG CGACCGACGG CCACCGCTGG TTCGTTCCCT CTGGAAGGAC TGGATCGAAG
CATCGTGAGG TGCTGACCAA GGAGCTCAAG GCCGGCGATC GACTGGTCTC GAAGTTCCCT
CGCTCGCGGA TCCAGCGGAC GACACCGTCA CCGTTCGGCA TCGCGCACGG GTTCACCTAC
GGCGACGGGA CCCGGTCGGG CACCGGCAGC ATGGCACTGC TGCGCCCCCC GAAGGACCTG
GCGATGCTGA AGTGGTTCTC GAACAGCCAC ACCTCGGCTT CAGGTGACAA CCTCCTGGTG
CACCATCTAC CGCGCTTCTT CAAGGAGCTG CCCGACCCCG ATGAGTCGGT CTCCTACCTG
TACGGGTGGC TGGCCGGCTA CTTCGCCGCC GACGGCTGCG TCGCGGCCGA TGGGACCGTG
ATCCTCAACT CGGCCCGGCG GGAGAACCTC GAGTTCGTAC GGATGGTCAC CACGCGACTC
GGCATCGCGA CCTATGGCAT CACCACCCAG TCGCGAGTAG GGCTGGGGAA GGAGCACTCC
GACCTGCACC GGGTGCACTT CGTCAACGAC GACCTCACCG AGAGCTTCTT CCTCCTCGAC
GAGCACCGGC GGCGCTTCGC GGAGGCGACC AAGAAGTATG CGCGACGGGG GTGGGTGGTC
CAGGCGGTCG AGGAGACGGA CCGCGTCGAG GAGGTGTATT GCGCGGAGGT CGAGGACGGT
CACGCGTTCA CGCTCGAGGA CAACATCCTC ACCGGCAACT GCTTCGGTTG CTCCGAGGGC
GGCAACGTCA TCACGTTCCT GATGAAGATC GACGGCCTGA CCTTCGGGGA GGCGGTCGAG
CGGCTCGCGG ACAAGGTCGG CGTGCAGCTG CGCCGCGAGG AGGGCGACGT CCGCGAGGAA
CGGCCCAAGG GTCCGCCGCG GCGGCGGCTC GTGGAGGCGC ACAAGGTCGC CCAGGAGTAC
TACGCCGACC AGCTCGCCAC CCCGGACGCT CTCGTCGCGC GGCAGTTCCT CGGTGGGCGC
GGCTTCGACC AGGCCGCGGC CGAGCACTTC GGCATCGGCT TCGCTCCTCG CGATGGGGAC
GCCCTGAAGA CGCACCTGCG CCAGAAGGGC TTCAGTGCCG AGGAGATGAC GGTCGGCGGG
CTGATCGGCC CGTCGGGCTA CGACCGGTTC CGCGGCCGGC TGCTCTGGCC GATCCGCGAC
GCCAGCGGCG ACACGATCGG CTTCGGTGCC CGCCGGATCT TCGACGACGA CCGGATCGAC
GCCAAGTACC TCAACACCTC CGAGACCCCG ATCTACAAGA AGAGCCAGGT GCTCTACGGC
ATCGACCTGG CCCGGCGCGA CATCGGCCGC TCCTCCCAGG CGGTGATCGT CGAGGGCTAC
ACCGACGTGA TGGCCTGCCA CCTCTCCGGC GTGACCACCG CGGTCGCGAC CTGCGGCACC
GCGTTCGGCG ACGACCACTC TCGCGTGCTG CGCCGCTTCC TCAACGACCA CCAGGTCACT
CACGGCGAGA TCATCTTCAC CTTCGACGGC GACGCCGCCG GCCAGAAGGC CGCGCTCCGT
GCCTTCGGCG GTGACCAGAA CTTCGTCTCC CAGACGTACG TCGCCGTCGA GCCCGGCGGG
CTCGACCCGT GCGACCTGCG GATCCAGCAG GGCGACGCCG CGGTCCGCGA GCTGGTCGCC
CGCCGGGTGC CGCTCTACCG ATTCGTCCTC ACCAATGTCG TTCGGGAGTT CGACCTGGAT
AGGGCGGACG GCCGGATCGC CGCCGTGAGG GAAGCCGCAA AGCTCGTGCT GAGTAGTCGC
GACAACTCCG TGGCCCAGAG CTCCTTTGCT CGCGACATCT CCGAGCTCAC AGGAGTCGAC
CCGAACGAGG TCCTCGTCGA AGTCAGGCGC GTCGTGGCGC GGCATCGGAA CGGGGACCGC
GGGGCGGTTG CCGAACCGCC GACGAATCGG AGTGCGGTTC CCAGCCTGCA CGACCCGCGG
TTCGCGATCG AGCGCGAGAC CCTCCAGCTG GTCATCCAGC ACCCGATGAC GATCGGTCGC
AGCACCGGCG ACATCGGCCC CAACGACTTC GTCCACCCGA CCTACCGGGC GGTGTGGGAG
CTGGTCGCGG CGGCCGGCGG CCCCGGCGCG GGCGCCGGCG ACCCGTCCTG GGCCAACCGG
CTGCGCGACG CCGCGACCGA CCCGGCGGCC TCCTCGGTGA TCAGCGCACT CGCCGTCGAG
CCGCTCAAGA AGGAGCCGGA CGCCGCGTAC GTCGCCGAGC ACGTGTTCCG GCTGCTCGAG
CTCACCGCGG CCCGGCGGAT CGCGGCCATC AAGTCCAAGC TGCAGCGCAC CAACCCGGTC
GAGCATGCGG AGGAGTTCAA CAAGATGTTC GGAGAGCTCG CCGCGCTGGA GGCGCACCGC
CGGGCGCTGC GCGACCGGCT CGCGGGGAGT GCCACGTGA
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| Protein sequence | MAGRIRDEDI AEVREKARID DVVSQYVTLR PAGGGSLKGL CPFHDEKSPS FNVNPSRGFF
HCLAGETKVL TWDGPRPISE LAGGTHRILN VHGDWAEAPL KSYGVQRLWR IVVTRNRERK
ELFATDGHRW FVPSGRTGSK HREVLTKELK AGDRLVSKFP RSRIQRTTPS PFGIAHGFTY
GDGTRSGTGS MALLRPPKDL AMLKWFSNSH TSASGDNLLV HHLPRFFKEL PDPDESVSYL
YGWLAGYFAA DGCVAADGTV ILNSARRENL EFVRMVTTRL GIATYGITTQ SRVGLGKEHS
DLHRVHFVND DLTESFFLLD EHRRRFAEAT KKYARRGWVV QAVEETDRVE EVYCAEVEDG
HAFTLEDNIL TGNCFGCSEG GNVITFLMKI DGLTFGEAVE RLADKVGVQL RREEGDVREE
RPKGPPRRRL VEAHKVAQEY YADQLATPDA LVARQFLGGR GFDQAAAEHF GIGFAPRDGD
ALKTHLRQKG FSAEEMTVGG LIGPSGYDRF RGRLLWPIRD ASGDTIGFGA RRIFDDDRID
AKYLNTSETP IYKKSQVLYG IDLARRDIGR SSQAVIVEGY TDVMACHLSG VTTAVATCGT
AFGDDHSRVL RRFLNDHQVT HGEIIFTFDG DAAGQKAALR AFGGDQNFVS QTYVAVEPGG
LDPCDLRIQQ GDAAVRELVA RRVPLYRFVL TNVVREFDLD RADGRIAAVR EAAKLVLSSR
DNSVAQSSFA RDISELTGVD PNEVLVEVRR VVARHRNGDR GAVAEPPTNR SAVPSLHDPR
FAIERETLQL VIQHPMTIGR STGDIGPNDF VHPTYRAVWE LVAAAGGPGA GAGDPSWANR
LRDAATDPAA SSVISALAVE PLKKEPDAAY VAEHVFRLLE LTAARRIAAI KSKLQRTNPV
EHAEEFNKMF GELAALEAHR RALRDRLAGS AT
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