| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1942 |
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| Symbol | |
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| ID | 4599847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2072359 |
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| End bp | 2073519 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639776540 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_923139 |
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| Protein GI | 119716174 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.439583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCGC CCACCTCACC GACCGGCAGT CCGGCCGGGG GGCTGGCCCT GGGGTCGCTG
CGCGTCGACA CCCCGGTGGT GCTCGCGCCG ATGGCCGGCA TCACCAACGC GGCCTACCGC
CGGCTGTGTG CCGAGCAGGG GGCCGGCCTC TACGTCTGCG AGATGATCAC CAGTCGGGGG
CTGGTCGAGG GCGACCAGCA CACCAAGGAC ATGCTGGTCT TCGACGAGCT CGAGACGATC
CGCTCCGTCC AGCTCTACGG CAGCGACCCG GCCTACGTCG GCAAGGCCGC CGAGATCCTC
TGCGCGGAGT ACGGCGTCGC GCACATCGAC CTCAACTTCG GCTGCCCGGT GCCCAAGGTG
ACCCGCAAGG GCGGCGGCGG CGCGCTGCCG TGGAAGCGCG GGCTGCTCGC CGAGATCCTG
GAGTCGGCCG TCGCCGCGGC CGCGCCGTAC GACGTGCCGG TCACGATGAA GACCCGCAAG
GGCATCGACG AGGATCACCT CACCTACCTC GACGCCGGCC GGATCGCGCA GGAGTCCGGA
TGTGCGGCGA TCGCGCTGCA CGGCCGGACG GTCGCGCAGG CCTACTCCGG CGCGGCCGAT
TGGGACGCGA TCGCGGCGCT GGTCGAGCAC GTGGACATCC CGGTGCTCGG CAACGGCGAC
GTCTGGGAGG CCGCGGACGC ACTGCGGATG GTCGAGGAGA CCGGCGTCGC GGGCGTCGTG
GTCGGCCGCG GCTGCCTGGG CCGGCCCTGG CTCTTCCGCG ACCTCGCCGC CGCGTTCGGT
GGCGAGGACG TCGCGACCCT GCCGGCCCTG GGCGAGGTGG CCGCGATGAT GCGCCGGCAC
GCCGAGCTGC TGTGCCAGCA CCTGGGGGAG GAGCGCGGCT GCAAGGAGTT CCGCAAGCAC
GTGACCTGGT ACCTCAAGGG TTTCGGCGCG GGCGGCGAGA TGCGGCGCTC GCTGGGCCTG
GTCGACAGTC TCGCGGCACT CGACCGGCTG CTGGCCGAGC TCGACCCGGA CGAGCCGTTC
CCGGAGCGCG AGCTGGGCGC CCCGCGCGGG CGCCAGGGAT CGCCGCGGGC CAAGGTCGCC
CTGCCCGAGG GTTGGCTCGA GGACGCGGAC GGTCGCGGCC GGCACGTCCA GGAGGACGCG
GACGAGACCA CCGGCGGGTG A
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| Protein sequence | MSSPTSPTGS PAGGLALGSL RVDTPVVLAP MAGITNAAYR RLCAEQGAGL YVCEMITSRG
LVEGDQHTKD MLVFDELETI RSVQLYGSDP AYVGKAAEIL CAEYGVAHID LNFGCPVPKV
TRKGGGGALP WKRGLLAEIL ESAVAAAAPY DVPVTMKTRK GIDEDHLTYL DAGRIAQESG
CAAIALHGRT VAQAYSGAAD WDAIAALVEH VDIPVLGNGD VWEAADALRM VEETGVAGVV
VGRGCLGRPW LFRDLAAAFG GEDVATLPAL GEVAAMMRRH AELLCQHLGE ERGCKEFRKH
VTWYLKGFGA GGEMRRSLGL VDSLAALDRL LAELDPDEPF PERELGAPRG RQGSPRAKVA
LPEGWLEDAD GRGRHVQEDA DETTGG
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