| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1928 |
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| Symbol | |
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| ID | 4596375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2056217 |
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| End bp | 2058979 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639776526 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_923125 |
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| Protein GI | 119716160 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTGGT CTGGTCGCGG GCAGCTCGGC TGGCCCGCGA CCATCGGCCT GCTGGCAGGG
GTCTACGTCG CAGGCGTCGG CGCGGTCGCG TTCGCGCCCC AGGACGATCC CGTCGCGACC
TGGTGGCCGG CGGCGGGCAT CGCGGCGGTG CTCGTGGCTT CGAGCCCGCG CCGGCGCTGG
TGGCTGCTCG CGCTGGGGAT CTGCGTCGTG AGCGGGATCG CGAACCTCTC GGCGGGCCGG
CCTCTGGACG TCTCGGCCGC GTTCGGCGTG GCCAACACCT CGGACGCGGT CGTGGCCAGT
GCTGTGCTGC TGTACGGACG GGACCGACTG CCGAGCCTCG ACTCGCCCGA AGACTTCATC
CGACTCGTCA CCGCCGCCTT TCTCGGCGGC CTCACGATGG CGACGATCGG GGCCACGGGC
GTCCATCTCC TCGAAGGCGG CTCGTTCGGA CGGATCTGGC TCTCGCTCGG CGCCTCACAC
GCTGCGGCCA CACTCGTGAT CGTGCCGGTC GCCATGGCGC GGCCCGCAGC GCGGAGCACG
CGTCGCTGGG AGGCCCCGCT CCAGGTGGTC GCGCTCGCGA CGATGACGCT CGTCGTGTTC
TCCCCCCACC AGTCGCTGTC GCTGTCCTTC CTGCCACTCC CCTTGATCGT CTGGGCGGCG
TTGCGCTTCG ACCTGCGTCT CGCGGCCTGG GAGCTGGTGG GCTTCGCGGT CCTGGTCACC
TTCCTGACCG CGCAGGGCTA CGGACCGTTC GGCGATCACT ACCGCACCGG AGAGCTCGAC
GCCCGGTCCA TGGGGTCGCT CTCCCAGCTC TACCTGATGT GCACAGCACT GCTGTGCCTG
CCCCTCGCGA TCGCGGTCGG TCAGCGTCGG CGGCTGCTCG ACCGGCTGAC GTCCAGCGAG
CGGCTCTTCC GCCGCAACTT CACCGAGTCC CTGATCGGCA TGGTCCTGAT GCGCAGCGGC
GACACCCCGC TCGAGATCGT CGACGTCAAC GAGGCGGCGG CGCGGATCGT CGGCCGCACC
GGCTCGCCCG TGGGCCGCGA CCTGGCCGAG CTGCTCGACA CCACCGAGCC GCTGGAGCTG
ATCGCCGCGC AGATGCTCGC GGGCGACCTC GACGGGTGGC GCGCGCAGAC CGGGCTGAGG
GACCGCCGCG GGTCCCGGGT CAACGTCGCG GTCTCGCTGC TGACCAACGA CCCGGAGCCG
ACCTTCTCGG CGCAGCTGCA AGACGTCACG GCGGAGTACG ATGCGCGCCG CCGGCTGGAG
GCCGCCGAGA AGCTGACCAG CGCGACCCTC GACACCACCG CGGCGATGAT CCTCGTGACG
GACCTGATGG GGGTCGTCGT CCGCGTCAAC GGCGCGACGA CCACGCTCAC CGGCTTCGAC
GAGGACGAGC TGGTCGGGGT GGCGGTCTGG GACCTCCCGT TCGCCCCGCC CGGCTCCGAC
GGCTACCCGG CCGGCCTCCC GGACACCCCC GAGGGCCAGG TCGGCCGGGA GACCGACGTG
GTGACCCGCT CGGGCCAGCG CCGGCGGATC CAGTGGAACA CCGGGTACGT CCACGACGAC
CGCGACCGGC CGACCCACAT CGTGCTCACC GGCACCGACC TCACCATGGA GCGGATGACC
GCGGGCCTGA ACCGACACCT CCTCGAGGCC GCCATCACCA CGGCCCTCAT CGGGATCGAC
ACCCAGGGCC GGATCACGGT CTTCAACCCG GGCGCCGTGA ACCTGCTCGG CTATGACGGC
CAGGACACGG TCGGCACGCC GTTCGTGGAT CTCTTCGATC CCGAGCAGCT CGCCGAGCGC
CTGTCCGGGG CCACCGGCGA GGAGGCTTTC GCCCGCCTGG TCGCGGGCAT CGACAGCGGC
GCGGACACCG GAACCCGGGA CTGGACGTGG ATCGGCGCCG ACGGCCGCCG CCACACGGTC
TCGATGTCGC TCAGCGTCGC CGCCGACACC TTCGCCGCAC GAGTCGGCTA CCTGTGTGCC
GGCCGCGACG TCACCGAGGC ACGCGCCAGC CAGGAGATGC TCGTCGCCGC ACTCGAGAAG
GAGCGGCTGG CGGTCGAGCG GCTGCGCCAG CTCGACGTGG CGAAGAGCGA GTTCGTCTCG
ACCGTGAGCC ACGAGCTGCG CACCCCCGTG GCCAGCATCG TGGGCTACAC CGAGCTGCTC
GAGGACGGCA CCGTCGTCGA CCCGGCCCCG GAGCAGCGCC CGATGCTGGA GAGCATCGCC
CGCAACGGCC AGCGGCTGAT CCTGCTCTGC GACGACCTGC TCACGCTCAG CGGGCTGGAC
TCGGGCGCCA CCGCCTGGCA GCACGACACC CTCGACCTGG CCACGCTGCT GCCGCCCGCC
GAGGAGGCGA TCCGCCCCCA GCTCACCGGC CGCGACCTCG AGCTGTCGAT GCTCGCGGAG
CCGGCGCCGG TCCTGGTGCT CGGCGACCGG GTCCAGCTCG AGCGGGCGCT GATCAACCTG
CTGGGCAACG CGGTCAAGTT CACCGAGGAC GGCGGTCGCA TCGAGTGCCG GGTCGGCCGG
CAGGACGACG AGGCCTGGCT GTCGATCAGC GACACCGGGC TCGGGATCCC CGTGGAGGAG
CAGAACGGGC TGTTCCAGCG CTTCTTCCGC TCCTCCACCG CGCAGGCGCA TGCGATCCAG
GGCACCGGCC TGGGGCTGTC GATCGTGGCC GCCACGGTCG CTGCCCACGG TGGGCGGATC
GACGTCGACT CCGCCCACCT GCAGGGCACC ACCTTCACCG TCCGACTGCC CCTGGCCCGT
TAG
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| Protein sequence | MSWSGRGQLG WPATIGLLAG VYVAGVGAVA FAPQDDPVAT WWPAAGIAAV LVASSPRRRW
WLLALGICVV SGIANLSAGR PLDVSAAFGV ANTSDAVVAS AVLLYGRDRL PSLDSPEDFI
RLVTAAFLGG LTMATIGATG VHLLEGGSFG RIWLSLGASH AAATLVIVPV AMARPAARST
RRWEAPLQVV ALATMTLVVF SPHQSLSLSF LPLPLIVWAA LRFDLRLAAW ELVGFAVLVT
FLTAQGYGPF GDHYRTGELD ARSMGSLSQL YLMCTALLCL PLAIAVGQRR RLLDRLTSSE
RLFRRNFTES LIGMVLMRSG DTPLEIVDVN EAAARIVGRT GSPVGRDLAE LLDTTEPLEL
IAAQMLAGDL DGWRAQTGLR DRRGSRVNVA VSLLTNDPEP TFSAQLQDVT AEYDARRRLE
AAEKLTSATL DTTAAMILVT DLMGVVVRVN GATTTLTGFD EDELVGVAVW DLPFAPPGSD
GYPAGLPDTP EGQVGRETDV VTRSGQRRRI QWNTGYVHDD RDRPTHIVLT GTDLTMERMT
AGLNRHLLEA AITTALIGID TQGRITVFNP GAVNLLGYDG QDTVGTPFVD LFDPEQLAER
LSGATGEEAF ARLVAGIDSG ADTGTRDWTW IGADGRRHTV SMSLSVAADT FAARVGYLCA
GRDVTEARAS QEMLVAALEK ERLAVERLRQ LDVAKSEFVS TVSHELRTPV ASIVGYTELL
EDGTVVDPAP EQRPMLESIA RNGQRLILLC DDLLTLSGLD SGATAWQHDT LDLATLLPPA
EEAIRPQLTG RDLELSMLAE PAPVLVLGDR VQLERALINL LGNAVKFTED GGRIECRVGR
QDDEAWLSIS DTGLGIPVEE QNGLFQRFFR SSTAQAHAIQ GTGLGLSIVA ATVAAHGGRI
DVDSAHLQGT TFTVRLPLAR
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