Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1925 |
Symbol | |
ID | 4596372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2052035 |
End bp | 2052883 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639776523 |
Product | sigma-70 region 4 domain-containing protein |
Protein accession | YP_923122 |
Protein GI | 119716157 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.31103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGT TGCCCGCCCC CTCCACCGAC GCTCCTCCGG ACCGGCTCGA CCCGAGCCTG GACCCCACGC GGGACCCCGA CTGCGGCCTG ACCCGCCCCG AGCGCGCCGA GCACACGGCG CGCCTGCTCG ACGAGGCCCA GCACAGCGAC GACGCAGGCG AGCGCGAGGA GGTGCTCGGC CGGGTCGTCG TGATCAACCG CGGTGTCGCG GATGCGGTCG CCGCCCGGTT CCGCAACCGC GGGATCCCCC AGGAGGACCT GCGCCAGGTC GCCTACGAGG GCCTGACCAA GGCCGTGCAC CGGTTCGACC CCGAGCTGCG CAACGACCTG CTCACCTACG CCGTCCCCAC CATCCGCGGC GAGCTGCAGC GCTACTTCCG CGACCAGGGC TGGACGGTGC GGCCCCCGCG GCGCATCCAG GAGCTCCAGT GGCGGGTGAA CCAGGTGATC GAGCGGCTCA CCCAGGAGCG CGGCCGGGAG CCCTCCGAGG ACGAGATCGC CGCCGAGCTC GACACCACGG TCGAGGAGTA CCGCGACGCC GCCTCGGCCT TCGGCTGCTT CCAGCCCACC TCCCTCGACC AGCCAGTGGG CCACGAGGGC GAGACTCCGG TCGGCGAGCT GATCGCCGGT GCGGACGCCG ACGGGCCCGC GACCGAGGCC CGGATGCTGC TCGCGCCCGT CGTACGCCGG CTCCCCGAGC GGCACCGCCG GATCCTCTAC CTGCGGTTCT TCGAGGACCT CACCCAGGAG GAGATCGGCC GCGACCTCGG CGTCACCCAG ATGCAGGTCT CGCGCCTGCT CAGCCGGATC CTCGGGGACC TCAGGGACGA GCTCAAGGAG GCCGGGTGA
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Protein sequence | MTTLPAPSTD APPDRLDPSL DPTRDPDCGL TRPERAEHTA RLLDEAQHSD DAGEREEVLG RVVVINRGVA DAVAARFRNR GIPQEDLRQV AYEGLTKAVH RFDPELRNDL LTYAVPTIRG ELQRYFRDQG WTVRPPRRIQ ELQWRVNQVI ERLTQERGRE PSEDEIAAEL DTTVEEYRDA ASAFGCFQPT SLDQPVGHEG ETPVGELIAG ADADGPATEA RMLLAPVVRR LPERHRRILY LRFFEDLTQE EIGRDLGVTQ MQVSRLLSRI LGDLRDELKE AG
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