Gene Noca_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1918 
Symbol 
ID4596365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2045848 
End bp2046621 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content73% 
IMG OID639776516 
Productsiderophore-interacting protein 
Protein accessionYP_923115 
Protein GI119716150 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.149107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACCA GGGCCCAGCA GTACGACGCG CGGGTGTTGC GCCGCGAGCA GCTCTCGGCG 
CACCTGGTCC GGCTCACCCT CGGCGGGGCG GGACTCGCGG GCTTCGAGAG CACCGGCATC
CCGGACGAAT GGGTGGGGCT CGTGGTCCCC GGGCAGTTCC AGAGCCGCTA CTACACGGTC
CGCTCGTGGG ACGGCTCGGA GCTGGTGCTC GACGTCGTCG TCCACGAGAG TGGGCTGGTC
ACCGAGTGGG CCCAGCTGGA CGTCGAGGGG CAGGCGGTCA CGATCACCGA GGCGAAGGGC
TCGTTCGCGA TCCCGGCCGA CGCGCAGTGG CTGATCCTGG TCGGCGACCT GACCGCGATG
CCGGCGATGG CCCGGATCGC CGAGACCGTC CGCGTGCGCA CCTCCGTGTA TGCCGAGGTC
CCGGACGACC TGCCCGACTA CCTCCCCCCG GGGCCGCAGG TGACCTGGCT GGACCCGCCG
GGCGAGGGGG AGAGCCGGCT CGCCGAGGTG GTCGAGGGCA TCGACTGGCC CGACGGTGCG
GGCTACTTCT GGATGGCCGG TGAGTCGGCG CAGATGCGGG CGATCCGCAA GCACCTGATG
CGGGTGCGGC ACCTGCCGAG CACGGCGTAC GACGTCATGG GCTACTGGCG CGGCGTCGCC
CACCGCCAGC CGCGGGCCGT CGACCCCGGC CCGATCTACC GGGCGGGCAA GGCGGCCGGG
AAGTCCGACG AGCAGATCTG GGCCGAGTAC GACGAGGCGG GGGAGCGCCG GTGA
 
Protein sequence
MSTRAQQYDA RVLRREQLSA HLVRLTLGGA GLAGFESTGI PDEWVGLVVP GQFQSRYYTV 
RSWDGSELVL DVVVHESGLV TEWAQLDVEG QAVTITEAKG SFAIPADAQW LILVGDLTAM
PAMARIAETV RVRTSVYAEV PDDLPDYLPP GPQVTWLDPP GEGESRLAEV VEGIDWPDGA
GYFWMAGESA QMRAIRKHLM RVRHLPSTAY DVMGYWRGVA HRQPRAVDPG PIYRAGKAAG
KSDEQIWAEY DEAGERR