Gene Noca_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1909 
Symbol 
ID4596410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2037929 
End bp2038267 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content73% 
IMG OID639776507 
Producthistidine triad (HIT) protein 
Protein accessionYP_923106 
Protein GI119716141 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.388726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGGACT GCCTGTTCTG CAAGATCGTC GCGGGAGACA TCCCCGGCGA GGTCGTGCAC 
ACCACCGAGC GGACCGTCGC GTTCCGCGAC ATCGACCCGA AGGCGCCGAC GCACGTGCTG
GTGGTGCCGC GGGACCACTA CACGAACGCG GCGGAGCTGG CGGCGGCCGA CCCGCAGGCC
ACGGCCGAGC TGGTGACGAC GGCCGCGGCC GTCGCGGCCG CGGAGGGGTA CGCCGACTAC
CGCATCGTGT TCAACACCGG CGCCGAGGCC GGCCAGAGCG TGTTCCACAC CCACCTGCAC
CTGCTCGCGG GCCGGCCGCT GACCTGGCCG CCTGGATGA
 
Protein sequence
MEDCLFCKIV AGDIPGEVVH TTERTVAFRD IDPKAPTHVL VVPRDHYTNA AELAAADPQA 
TAELVTTAAA VAAAEGYADY RIVFNTGAEA GQSVFHTHLH LLAGRPLTWP PG