| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1896 |
|---|
| Symbol | |
|---|
| ID | 4596397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2023424 |
|---|
| End bp | 2024986 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 639776494 |
|---|
| Product | putative DNA-directed DNA polymerase |
|---|
| Protein accession | YP_923093 |
|---|
| Protein GI | 119716128 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.582074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCGGG TGATGGCGAT CTGGTGCCCG GACTGGCCGG TGGTCGCCGC GCTGGCCGAC
GAGGGCCTGC CGACCCACCT GCCGGCGGCG GTCTTCAGCG CGAACATCGT GCAGGCGTGC
AACGCCGGCG CCCGGGCCTT CGGCGTACGC CGCGGCATGC GCCGGCGCGA CGCGCAGGGC
CGGTGCCCGG AGCTGAAGGT GTACGCCGCG ATCCCCGACC GCGACGCCCG GGCCTTCGAG
CCGGTGCTGG CCGCGGTCGA GGAGCTGCGG CCCGGGGTGG CGCCGCTGCG GCCGGGCCTG
GTGGCGCTGC GCGCGCCGGG CCGGTTCTAC GGCGGCGAGC CGGCGGCCGC GGCGCTGGTC
GCCGAGCGGC TGGTGGGGCT CGGGGTCTGG GACTGCCGGG TCGGGGTCGC TGACGAGCTG
TTCACCGCCG AGCAGGCCGC CCGGCGAGCC GCCCCGCAGG ACTGCTTCGT GGTCGAGCCG
GGGGAGTCGG TGCCGTTCCT GCGGGGGCTG CCCGTCGAGG TGATCGAGGA CCTTCCCGAC
GGCCGCGACG CCGTCAGCCT GCTCAAGCGG CTCGGGCTGC GCACCCTCGG CCAGCTCGGT
GACCTGGCGG CGGCCGACGT GCGCGACCGG TTCGGCCGGC AGGTGGCGTG GGTGCACCGG
GTGGTCGGCG GGGACGGCGC CGAGCTGCTC GCGACCCGCA TCCCGCCGCC GGAGCTGGCC
TGCCACGTCG ACTTCGAGCC GCCACTGGAC TCCGCCGAGA CGATCGGCTT CAGCGTGCGG
CAGACCGCGG ACCGGTTCGT CGCCGGGCTG GCCCGCCAGC ACCTGGTCTG CACCGAGGTG
CGGATCGAGG CCCGCTGCGA GGGCGAGGCC GAGCCGTCCT GCTCGCGGGT CTGGCTGCAC
CCGCGGTGGT TCGGCGCCGC CGACCTGGTC GACCGGCTGC ACTGGCAGCT CCAGGGGGCC
CGGTCCGGGG TGCCCGGCCG GGGCGGACAG GTGCGGGCAC CGGTCGACCG GGTGGTCTTC
GAGCCGGTGA CCGTGGTCCC GGACGCCGTG CACGCCGACG GACTGTGGGG CGGGACCGAG
GAGCGGGTGG AGCGCGGCAT CGCCCGGGTG CAGGGGCTGC TCGGCCACGA GGCCGTGGTG
CGGCCGGTGC TCCAGGGCGG CCGGTGCCCG GGCGACCGGC AGGCGTTCGT GCCGTGGGGG
GAGCGGCCCA CCGGGCTGCG ACCGACCGGT CCGCCGTGGC CGGGCAGCAT CCCGCCGCCC
GCGCCGTCAC GTGTGCTGGC GACGCCGTGG TCCGCCGAGG TCGTCGGTGC CACCGGCCGT
CCCGTCGCCG TCGACGAGCG CGGGTCGGTC ACCTGTGCGC CGGAGCGGTT CCGGGTCGAC
CGCTCCGGCG GGTGGCAGCC GGTCGCCGCC TGGGCCGGCC CGTGGCCCAT CGACGAGCTC
TGGTGGGAGG CGCCCCCGCG GCGCCGCAAG GTCGCGCGCT TCCAGGTGGT CGGCGTCGAC
GGCAGGGCCT GGTTGCTCAC CTGCGAGGAG GGCGTGTGGT GGACCGAGGC GGCCTATGAC
TGA
|
|---|
| Protein sequence | MPRVMAIWCP DWPVVAALAD EGLPTHLPAA VFSANIVQAC NAGARAFGVR RGMRRRDAQG
RCPELKVYAA IPDRDARAFE PVLAAVEELR PGVAPLRPGL VALRAPGRFY GGEPAAAALV
AERLVGLGVW DCRVGVADEL FTAEQAARRA APQDCFVVEP GESVPFLRGL PVEVIEDLPD
GRDAVSLLKR LGLRTLGQLG DLAAADVRDR FGRQVAWVHR VVGGDGAELL ATRIPPPELA
CHVDFEPPLD SAETIGFSVR QTADRFVAGL ARQHLVCTEV RIEARCEGEA EPSCSRVWLH
PRWFGAADLV DRLHWQLQGA RSGVPGRGGQ VRAPVDRVVF EPVTVVPDAV HADGLWGGTE
ERVERGIARV QGLLGHEAVV RPVLQGGRCP GDRQAFVPWG ERPTGLRPTG PPWPGSIPPP
APSRVLATPW SAEVVGATGR PVAVDERGSV TCAPERFRVD RSGGWQPVAA WAGPWPIDEL
WWEAPPRRRK VARFQVVGVD GRAWLLTCEE GVWWTEAAYD
|
|---|
| |