| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1886 |
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| Symbol | |
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| ID | 4596387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2011314 |
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| End bp | 2012216 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 639776484 |
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| Product | helix-hairpin-helix repeat-containing competence protein ComEA |
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| Protein accession | YP_923083 |
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| Protein GI | 119716118 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.528332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCA CCCGACCCGT CCGTCCTCGC CCCGAGCGTC AGGAGGTCGT CGCCCGCCGG
CTCGCGTTGC TGCACGCCGA GCTGGCGGGT GCCCGCCCGC CGGCCCCGCC GCCCGACCCG
CCCCCTGCGC CACTGGCCGA ACCACTGGCC GAACCCCTGG CCGAACCCCT GGCCGAACTC
CTGGCCGAGC CGCCCGCGGT GCCCGTCCCC GGACGGCACG CCTCCCGGCG ACCCGGACGT
TCGGTCGCCG TGCTGCCTGC GACCCTGCGC GGTCGGGTGG CCCTGGGGCC GGCGCAGCTG
GCGGTCGTCG CGCTGGTCGT CGCCCTCGGG CTCGGCGTGA CGAGCTGGTG GGTGGTCCGC
GGGGACGCCG ATCGGCTCGA GGCGCCCGCG CTCGAGCCGA CCGGCGCGGC CCTGGTCAGC
GAGGGGCCGC TCTCTGACGC CTCCCCGGTC GCCGCTGAGG CCACGGCTTC CCCTGCGACG
GTCACCGTGG ACGTGACCGG GAAGGTGCGC CGGCCCGGGA TCGTCGTGCT CGACACCGGC
GCCCGGGTCG TGGACGCCCT CGAGGCGGCC GGAGGCGCCC GTCGGGGCGT CGACCTCTCC
GGGCTGAACC TCGCCCGGGT CCTCGTCGAC GGCGAGCAGG TCGTGGTGGG GGAGCCGGCG
CCCACGCCGC TCGGGGCGGC CGCGGTGCCG ACCCCCGGGG CGCCAGGCGG GCCACTGGTC
GACCTCAACA CCGCCACCCA GGCCGAGCTC GAGGCGCTGC CGGAGGTCGG CCCCGTCACG
GCACAGGCGA TCCTCGCGTG GCGCGACGAG CACGGTGGCT TCACCTCGGT CGACGAGCTC
CTGGAGGTCG ACGGCATCGG CGACGCGACG CTCGGGCAGC TCGCCCCGTT CGTGACGGTC
TGA
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| Protein sequence | MPTTRPVRPR PERQEVVARR LALLHAELAG ARPPAPPPDP PPAPLAEPLA EPLAEPLAEL
LAEPPAVPVP GRHASRRPGR SVAVLPATLR GRVALGPAQL AVVALVVALG LGVTSWWVVR
GDADRLEAPA LEPTGAALVS EGPLSDASPV AAEATASPAT VTVDVTGKVR RPGIVVLDTG
ARVVDALEAA GGARRGVDLS GLNLARVLVD GEQVVVGEPA PTPLGAAAVP TPGAPGGPLV
DLNTATQAEL EALPEVGPVT AQAILAWRDE HGGFTSVDEL LEVDGIGDAT LGQLAPFVTV
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