Gene Noca_1867 details

Gene Information

• Locus tag: Noca_1867
• ID: 4597187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 1991291
• End bp: 1993141
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639776465
• Product: Na+/H+ antiporter NhaA
• Protein accession: YP_923064
• Protein GI: 119716099
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [P] Inorganic ion transport and metabolism
• COG ID: [COG1651] Protein-disulfide isomerase; [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGCCG AAGGCCGCGG GCAGACGCGG GCCCGGCGCC GGTCCCTGGC CGCACAGCTC 
TCGGTCCCCG TACGTCGCTA CCTGAACACC GAGGCCGGCA GCGCGGGCCT CCTGCTCGGC 
GCCACGGCCC TGGCCCTCCT CTGGGCGAAC TCGCGGTGGT CCGGCAGCTA CGAGTCGCTG 
TGGAGCGCGC AGGCGGCCGT CTCCGTGTCC CGCTGGGACC TGTCGATGGA CCTCGGGCAC 
TGGGTCAACG ACGGCCTGAT GGCGCTGTTC TTCTTCGTGA TCGGCCTGGA GGTCCGCCGC 
GAGTTCTCCG TCGGCGAGCT CACCGATCCG CGCCGCGCGG CGATCCCCGT GCTCGCGGCG 
CTGGGCGGCC TGGCCGTCCC GGCGCTGCTC TACGTCGCGA TCGCCCCTGG GTCGGCCGCG 
CACGGTTGGG GTGTGGTCAT CGGCACCGAC ACGGCGTTCC TGCTGGGTGC CCTGGCCGTG 
GTCGGCCCGA CCTTCGCGAC CCAGCTGCGG ATCTTCCTGC TCACCGTCAC CGTGATCGAC 
GACATCGTCG CGGTCAGTGT GATCGGCCTG TTCTACAGCG ACTCCCTCGA CCCCGCCGCG 
ATCGGCGTGA TGGCGGTGTT CCTCGTGCTG ATGGCCGCGC TGAGCCGGCT CGGCGTGTGG 
CGCGCGGCCC CCTATGTGCT CGCCGTCCTC GGGCTGTGGA TCGCGACGGT CCAGTCGGGC 
CTGCACGCCT CGATCGCGGG GATGCTCGGC GGGCTGCTCG TCGCCGCCCA CTCCCCCACC 
CGCGAGGCCG TCGAGGGCGC CGCGAGGCGG TTCCGGGCGT TCCGGCAGTC CCCCGACGTC 
CAGGTCGGCA GGTCCGCCCG CCTTGGGCTG GCCCAGGCGG TGTCGGTCAA CGAACGGCTG 
CAGGCCGCAC TGCACCCGTG GACCAGCTAC CTCGTCGTAC CGCTCTTCGC CCTCGCGAAC 
GCCGGCGTCG ACCTGCGTGA CGGCGTCCTG GGCGACGCCC TGGCCTCCCG CCTCACGTGG 
GCCGTGGTGG TGGCGCTGGT CCTGGGCAAG CTGGCCGGCA TCGGACTGGC CTCGGTGGCG 
GGCGTCCGTG CCGGTCTCGG TCGGCTCCCG CGCGGCGTCC GGCTCGGCCA CGTCTTCGGC 
GGCGGCGCGC TGTCGGGGAT CGGCTTCACT GTCGCGCTGC TGATCGCCGG GCTCGCCTTC 
GAGTCCGACC AGCGCGACCG GGCGACCGTC GGGATCCTGA TCGCGGCGGT GCTGGCGACC 
GGTCTCGGCT GGGCGGTCTT CCACGCCGCC GCCGTGCTCC GGGGCCAGAC CGACGCCGAC 
CTGCCGAGGT TCCTCGATCC GCCCGTCGAC GCCCGGCACG ACCACGTCCG CGGCCGGGAG 
GACGCGCCGC TGACGCTGGT CGAGTACGGC GACTTCGAGT GCCCGTTCTG CGCTCGGGCC 
ACGGGCGTGA CCACGGAGCT CCGGGAGCGC TTCGGTGACG ACCTGCGCTA CGTGTTCCGC 
CACCTCCCGC TGGTCGACGT GCACCCGCAC GCCGAGCTGG CCGCCCGAGC CGCCGTGGCC 
GCGGACCACC AGGGTCGCTT CTGGGAGCTG CACGACCTGC TGTTCGAGCA CCAGGGCGAG 
CTGGAGGTCG AGGACCTCGC GGGGTACGCC GCCGACCTCG GCCTCGACGT CGAGGCGTTC 
CTGCGCGACC TGGAGGAGGA CGACACGGCC GACCGGGTCC GGAGGGACGT GGCGAGTGCG 
GAGGCAAGCG GCGCCCGCGG GACGCCGACC TTCTTCGTCG GCGGGGTGCG GCACACCGGA 
CCGCACGACG CCGAGACCCT GGCCCGGGCG CTCGAGGAGT CGCGCACGTG A 

 

Protein sequence

MRAEGRGQTR ARRRSLAAQL SVPVRRYLNT EAGSAGLLLG ATALALLWAN SRWSGSYESL 
WSAQAAVSVS RWDLSMDLGH WVNDGLMALF FFVIGLEVRR EFSVGELTDP RRAAIPVLAA 
LGGLAVPALL YVAIAPGSAA HGWGVVIGTD TAFLLGALAV VGPTFATQLR IFLLTVTVID 
DIVAVSVIGL FYSDSLDPAA IGVMAVFLVL MAALSRLGVW RAAPYVLAVL GLWIATVQSG 
LHASIAGMLG GLLVAAHSPT REAVEGAARR FRAFRQSPDV QVGRSARLGL AQAVSVNERL 
QAALHPWTSY LVVPLFALAN AGVDLRDGVL GDALASRLTW AVVVALVLGK LAGIGLASVA 
GVRAGLGRLP RGVRLGHVFG GGALSGIGFT VALLIAGLAF ESDQRDRATV GILIAAVLAT 
GLGWAVFHAA AVLRGQTDAD LPRFLDPPVD ARHDHVRGRE DAPLTLVEYG DFECPFCARA 
TGVTTELRER FGDDLRYVFR HLPLVDVHPH AELAARAAVA ADHQGRFWEL HDLLFEHQGE 
LEVEDLAGYA ADLGLDVEAF LRDLEEDDTA DRVRRDVASA EASGARGTPT FFVGGVRHTG 
PHDAETLARA LEESRT