Gene Noca_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1864 
Symbol 
ID4597184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1988488 
End bp1989603 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content72% 
IMG OID639776462 
ProductATPase domain-containing protein 
Protein accessionYP_923061 
Protein GI119716096 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGAC GCGCGTCCAC CGGTGTCGAG ATGGCGGGAG GAACGATGGT CCGCGGCAGC 
CTGAGCCTCG AGCGCCGGGT CGTCGGCTAT GTGCTGGCGG CGGTGGGGTC TGCCGGCCTC
CTCGCCCTGC TGGTCCCGCT GCGCGTTCAC CTCGACCTAG CCAGTGAGGC GCTGCTCTTC
CTCCTGCTGG TCGTCACCAC CGCGATCGTC GGCGGTCTTG GCCCGGCGCT CCTCGCGTGC
GTGCTGTGCT CGGCGATCCT GAACTTCTTC TTCACCGCTC CGTTCCACAC CTTCCGCATC
CACGAGGCCA GCGACATCGT GGCGGTGCTC GTGTTCGCGA TGGTTGCTGT GATGGTCAGC
TGGGTCGTCG ATCTCGCTGC CCGGCGAGCG TCCGCGGTAC GAGAAGCGGC CGAGCTCGAG
GCCGGCAACC GGCTCCGCAC CGCGCTCCTC GCCGCGGTCG GCCACGACCT GCGCACTCCG
CTGGCGACTG CGAAGGCCGT CGTCTCCGGA CTCCGTAGCC GCGAGGTGAC GCTCGCTGAG
GACGACCGCC ACGAGCTCCT CGAGACCGCT GACGACGCAC TCGACCGGTT GGCCGACCTG
ATCGACGACC TCCTCGACCT CAGCCGGCTG CAGGCCGGGG CGCTGCCGGT CCGCACCCGG
GCGGTGCCGG TCGAGGACAT TGTCGCCCGG GCGCTCGACG ACCTGGGCGT GGTGCCTCGC
GCCGTCGTCC TGGACCTGCC GGAGCAGGTG CCGGAGGTCC TGGTCGACCC CGCCCTGCTG
GAGCGGGTGA TCGTCAACGT CGTGGCCAAC GCCCAACGCT ACGCACCTGG TCCGCCGCTG
ATCACTGCGG CCGCCGTCGG GGATCGACTG GAGCTGCGCG TCATCGATCG CGGCCCGGGG
ATCCCGACTG CCGATCGGGA CCGGGTGTTC GTCCCCTTCC AGCGGCTGGG TGACACCGGC
CCGGCGGGCC TGGGACTGGG CCTGGCCCTC TCCCGGGGCC TGGTCGAGGC CATGGGGGGC
CGCCTGGTGC TCGAGGAGAC GGCCGGTGGC GGGCTGACGC TGGTCATCTC GTTGCCGACG
GCATCGACCG CACCCCCCGT GCAGGTGACC CCATGA
 
Protein sequence
MVRRASTGVE MAGGTMVRGS LSLERRVVGY VLAAVGSAGL LALLVPLRVH LDLASEALLF 
LLLVVTTAIV GGLGPALLAC VLCSAILNFF FTAPFHTFRI HEASDIVAVL VFAMVAVMVS
WVVDLAARRA SAVREAAELE AGNRLRTALL AAVGHDLRTP LATAKAVVSG LRSREVTLAE
DDRHELLETA DDALDRLADL IDDLLDLSRL QAGALPVRTR AVPVEDIVAR ALDDLGVVPR
AVVLDLPEQV PEVLVDPALL ERVIVNVVAN AQRYAPGPPL ITAAAVGDRL ELRVIDRGPG
IPTADRDRVF VPFQRLGDTG PAGLGLGLAL SRGLVEAMGG RLVLEETAGG GLTLVISLPT
ASTAPPVQVT P