| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1857 |
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| Symbol | |
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| ID | 4597177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1981981 |
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| End bp | 1982718 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639776456 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_923055 |
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| Protein GI | 119716090 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.678216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACA TCACCTTCGA CTTCTCCGGC AGGACCGTCT TGGTCACCGG CGCGGCCCGC
GGCATCGGCC TCGAGCTGGC GCGCCGCTTC CAGGTGTCCG GGGCGAGCAC GTACCTGCTC
GACGCCGACA GCGACGCGGT CCGCGAGGCG GCCTCCGACC TTGGGGCGCG CGGGCTCGCC
GTCGACGTGA GCGACACCGA TCAGGTGGAG AGCGCCGTGC GGAACGCCCA CGACGAGACC
GGCCGGGTCG ACGTGGTCGT TAACAACGCC GGGATCCTGC GGGACAAGAT GCTCTGGAAG
CTGACCGACG ACGACTGGGA CCGCGTGCTC GCGATCCATG CCGGTGGCAC CTTCCGGATG
ACTCGCGCCG CAGTGCCGTA CTTCCGGGAG CAGCGCTACG GCCGGGTCGT GAATGTCACC
TCGTTCACCG GCCTGCACGG CAACCTCGGC CAGGCCAACT ACGCGGCCGC CAAGGCCGGG
ATCATCGGCT TCACCAAGAC CGCGGCCAAG GAGCTCGCCG GCTTCGGTGT CACGGTGAAC
GCGATCTCGC CGAATGCGGA GACCCGGATG ATCGCCTCGA TCCCGGACGA GCGGAAGGCG
GAGATCGCCG CCACGATCCC GCTCGGCCGG TTCGCCGACC CGAGCGAGAT GTCGGCCGCG
GTCTGCTTCC TCGCGTCGCA GGACGCCGGG TACATCACCG GCACGGTGCT GCCGGTCGAC
GGCGGCATCG CGATGTGA
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| Protein sequence | MSDITFDFSG RTVLVTGAAR GIGLELARRF QVSGASTYLL DADSDAVREA ASDLGARGLA
VDVSDTDQVE SAVRNAHDET GRVDVVVNNA GILRDKMLWK LTDDDWDRVL AIHAGGTFRM
TRAAVPYFRE QRYGRVVNVT SFTGLHGNLG QANYAAAKAG IIGFTKTAAK ELAGFGVTVN
AISPNAETRM IASIPDERKA EIAATIPLGR FADPSEMSAA VCFLASQDAG YITGTVLPVD
GGIAM
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