| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1851 |
|---|
| Symbol | |
|---|
| ID | 4597171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1974566 |
|---|
| End bp | 1976164 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639776450 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein |
|---|
| Protein accession | YP_923049 |
|---|
| Protein GI | 119716084 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCGA GGACCGAGTT CGACGTCGTC GTCGTCGGCT CCGGCGCGGC CGGGCTCGTC
GCCGCGCTGA CGGCGGCGCA CGCTGGCGCG TCGGTGCTGG TGCTCGAGGC GACCGACCGC
TGGGGCGGCT CGACGGCCGT GTCCGGGGGA CTGGTCTGGG CGCCGGACCA CCACCACGCC
GACGAGAAGG GTATGAGCGA CTCGCGGGAG GAGGTGCTGA CGCACCTGCG CGGCTGCGCC
TACGCCCGCG ACGACGCCCG TCTCGTCGCC TTCGTCGACG CCAGCCCGCA GGCGGTGCGC
TTCGTCGAGG AGCACACCCC GCTCACCTTC CGGGCGATCG ACTACCCCGA CACGTTCTCG
GAGCGTGCGG GCGGCAAGCT GCACCGGCAC CTCGAGTCGC TGCCCCAGGA CTCGAGTCCG
CTCGGCCGCT GGCAGGACCT CTTCTGGACC CAGGACGAGC CGCATACGCT GATGAGCGAG
ATCCTGCCGA TCGGCGCCCA CGTCTACGGC CTGCCGCTCG ACCTGCCCAG CGTCACCGAG
CGGCGTGAGC GCGGCCTCGT CACCGGCGGT ACGGCGCTGG TCACCGGCCT CCTGCACGGG
GTCGACGCCG CAGGTGTCAT CCGGCGGAAG AACGCCCGTG TTGATGCCTT GGTGGTCGAG
AACGGTCGGG TCCGGGGAGT CCGCACCGGG GTCGAGGTGA TCGGCGCCCG CCGCGGCGTC
GTGCTCGCCT CGGGTGGGTT CGAGTGGAAC GACGACCTCA AGGGGCGCCA CCTGGCGGTG
CCGATCACCC ACCCGGTCAC CCCGCCGGTG CAGCACGGTG ACGCCTTCCG GCTCGCCGGG
ACGGTCGGTG CGGCGTTCGC ACACACCAGC GAGAACTGGG CGTGGCCCGC GGTCGAGGTG
CCCACCGACA CCTGGCCGGA CGGGACGCCC CGGCACCACC TCTCCTTCAG CGAGCGTTAC
ATGCCGCATT GCCTGTGGGT GAACGGCGCT GGCCGGCGCT TCGTCAACGA GTCCAGCCAC
AACGCAGCGC TGTCGCTGGG AGAGGTGGAC ACCACCTCGC ACACCCCGCG CAATCTGCCC
GCGTGGTCGG TGATGGATGC ACAGTTCCGC GCCCGCTACC AGGTGGCCGG AGTGCTGCCG
GGCGAGGCGG CCACGGGCTG GATCGTCGAG GCCCCTACGG TGGCCGACCT CGCGGAGCGG
ATCGGCGTCG ACCCGACCGC GCTGGCCGAG ACCATCGACC GGTTCAACAC CCACGCGAAG
GCGGGCTCCG ACCCCGACTT CGGCCGGGGA CGGAGCGCCT ACGAACGGGC CATGGGCGAC
CCGACCGCGG AGTTCCCGAA CATCGGCACG GTCGAGGTCG GCCCGTTCAC CGCGGTCGCG
ATCCGGCCGA GCACCGTCGG TACCAAGGGC GGGGTCCTCA CCAACGCGAA CGCCGAGGCC
CTCGACCACG ACGGTGACCC GGTCCCGGGT CTGTACGCCG CCGGCAACGC GATGGCCGCG
GTCTTCGGAC CGGGCATCTC CGGCGGCGGC ATGACGATCG GCAACGCGGT CGCCTGGGGC
TGGCTGGCCG GGACGAACGC GGCTCGGTCG CGCTCATGA
|
|---|
| Protein sequence | MTARTEFDVV VVGSGAAGLV AALTAAHAGA SVLVLEATDR WGGSTAVSGG LVWAPDHHHA
DEKGMSDSRE EVLTHLRGCA YARDDARLVA FVDASPQAVR FVEEHTPLTF RAIDYPDTFS
ERAGGKLHRH LESLPQDSSP LGRWQDLFWT QDEPHTLMSE ILPIGAHVYG LPLDLPSVTE
RRERGLVTGG TALVTGLLHG VDAAGVIRRK NARVDALVVE NGRVRGVRTG VEVIGARRGV
VLASGGFEWN DDLKGRHLAV PITHPVTPPV QHGDAFRLAG TVGAAFAHTS ENWAWPAVEV
PTDTWPDGTP RHHLSFSERY MPHCLWVNGA GRRFVNESSH NAALSLGEVD TTSHTPRNLP
AWSVMDAQFR ARYQVAGVLP GEAATGWIVE APTVADLAER IGVDPTALAE TIDRFNTHAK
AGSDPDFGRG RSAYERAMGD PTAEFPNIGT VEVGPFTAVA IRPSTVGTKG GVLTNANAEA
LDHDGDPVPG LYAAGNAMAA VFGPGISGGG MTIGNAVAWG WLAGTNAARS RS
|
|---|
| |