| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1846 |
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| Symbol | |
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| ID | 4597166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1970859 |
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| End bp | 1971584 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639776445 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_923044 |
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| Protein GI | 119716079 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0202435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAAGC CGGGCTCGGT CGTCGTCACC GGCGGCTCGC GTGGGATCGG CAGGGCCTTC
GTCGTCGAGG CCGCGCGACG CGGGTACGAC GTGTTCTTCA CCCATCGGGG ACGTGCCTCG
GACGCCGCGG ACACCGTAGC CGCCGCGGGG GACACGACGG CCGTGCGCGC CGTGGAGGCG
GACCTGCTCG ACCGGACCGC GCTCGAGGGC GCGGTCGCGA CGGTCCTCGA GCACGGGCCG
GTGCACATCC TGGTCAACAA CGCCGGCACG ATGGCCCACG GCCTCCTCGG CGAGCTGACC
GAGGAGGGCT GGCGCCGGTC CTTCGACGTG CATGTGACCG CCCCGATGGT CCTGGCCCGC
GGGTTCGCCG AGTCGTTGGC GGCAACCGGT GGTGCGATCC TCAACGTGTC CTCCACCGGC
GGCGTCGTCG GATCGGTGCA CGGCGCCGCC TACGGTGCCA GCAAGGCGGC GATCCTCGGC
CTGACCAAGT CGCTGGCCCG CGAGCTCGCC CCGTCCGTGC GGGTGAACAC GCTGGCACCC
GGGCCGGCGG GCACCGACAT GTATGCCGAC CTGCCCGAGG ACGAGCGCCG TGCCGTCGAG
GACGAGACGC CGCTCGGTCG CGTCGCCGAG CCGCGCGAGA TCGCCAAGGC GGGCCTGGAC
CTGTGCCACT GGACCTACGC GACCGGCCAG ACGCTCGTGG TCGACGGCGG ACGGGTGATG
ACGTGA
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| Protein sequence | MTKPGSVVVT GGSRGIGRAF VVEAARRGYD VFFTHRGRAS DAADTVAAAG DTTAVRAVEA
DLLDRTALEG AVATVLEHGP VHILVNNAGT MAHGLLGELT EEGWRRSFDV HVTAPMVLAR
GFAESLAATG GAILNVSSTG GVVGSVHGAA YGASKAAILG LTKSLARELA PSVRVNTLAP
GPAGTDMYAD LPEDERRAVE DETPLGRVAE PREIAKAGLD LCHWTYATGQ TLVVDGGRVM
T
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