Gene Noca_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1845 
Symbol 
ID4597165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1970515 
End bp1970862 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content69% 
IMG OID639776444 
Productendoribonuclease L-PSP 
Protein accessionYP_923043 
Protein GI119716078 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0574701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTTC CACTCCGTCC CGCCGTTGCC GCCGGCGACT TCGTCGCCAT CTCGGGCCAG 
GTCGGCGTCG CCGATGGTGC CCTCGTCGAG GGCGGGATCA GCGCCGAGGC CAGGCAAGGC
CTGGCCAACC TGGTCGCCGT GCTCGAGGCG AACGGGCTGA CCACCGCAGA CGTGGTGAAG
ACCAATGTGT TCCTGACCTC GATGGACGAC TTCGCCGCGA TGAACGAGGA GTACGCCAAG
GTCTTCACCG AGGACTTCCC GGCGCGGTCC GCGGTCGCGG TGCACCAGCT CCCGATCGGC
GCGGTCTTCG AGATCGAGGC GTGGGCCTAC CGCGGGAACC AGCGGTGA
 
Protein sequence
MSLPLRPAVA AGDFVAISGQ VGVADGALVE GGISAEARQG LANLVAVLEA NGLTTADVVK 
TNVFLTSMDD FAAMNEEYAK VFTEDFPARS AVAVHQLPIG AVFEIEAWAY RGNQR