| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1842 |
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| Symbol | |
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| ID | 4597162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1965841 |
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| End bp | 1967025 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639776441 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_923040 |
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| Protein GI | 119716075 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.843132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCA AGAAGGCGTA CCTCGCGGCT GGCGCCACGC TGGCGTTGGC GCTCTTCGTC
AGCGCGTGCG GCAGCGACTC GGGCGGGTCC GGCGGCGGTG GCGATGACAC GATCACCGTG
GCGGTCGCGG GTCCCATGAC CGGAGACAAC GGCATCTACG GCCAGGATCA GCTGTCGGGC
GTGCAGTTCG CAGCGAAGGA GATCAACGAC TCGGGCGGGA TCCCTGACGG TCCGTTGAAG
GGCAAGAAGA TCAAGGTCGT CAAGTTCGAC GACGTGGCCG ACCCCAACCA GGGTGCGTCC
GTGGCGCAGA AGATCTGTGA CGACACCAGC ATCATGGCGG TCTTCGGCCA CAGCAACTCC
TCGGTCACGC TCGCCGCGGA GCCGATCTAC GAGCGCTGCG GGGTGCCGCT CTTCGTCAGC
TACTCGTCGA ACCCGGAGAT CACCGCGGAG CTACACGAGA ACCTGTTCCG CACGCTCATC
GACGACGCCA AGATGGGCAG CGAGATGGCG AGTTTTTCCC ACGACCAGCT CGGCTTCAAG
AAGGTCGGCG TCATCGCCTC CGACGACGAC TACGGCGACG GCCTGAAGAC CAACTTCAAC
AAGACGGCCG AGGAGATCGG CCTCGACGTC GCGAAGACCG TCACGACGTC GGCGAAGCAG
AAGGACTTCA CGCCGCAGCT GACCGAGCTC CGCAACGCCG GTGCCGACTC GCTGGTGCTC
CTGAACACCT ACACGGACGC CGCGCTGCAG ATCAAGCAGG CCGACGCGAT GGGCTGGGAC
GTCCCGATCT TCGTCACCCC GGGCTCGAAC AGCCCGGAGC TGGTCAAGAT CGCCGGTGAG
AAGGCGGCGG AGGGCACAAT CGTCGCCGCG GTCTTCGACC CCAACTCGAG CGAGCCGGGC
CCGGCGAAGT TCGTCAACGA CTTCACCGCC GCCAACGGCA AGGGTCCGGG CGAGTCCGCC
GCGATGTCCT ACGACTCCTT CTACGTGTTC CTGACCTCCC TGGAGAAGGG TGCGAAGGAC
CGCAAGAGCG TCATCGAGAA GTCCGCCGAG ATCGGGACGT TCACACTCCC GATCCGCGGC
GAGCTGATGT TCAACGAGAC CCACGAGCCG ACGGTCGTGC CGGGCAAGCC CGCGCAGATC
CTGCTCCAGG TCAAGGACGG CCAGATCGGC AGCTACGCCG GCTGA
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| Protein sequence | MKFKKAYLAA GATLALALFV SACGSDSGGS GGGGDDTITV AVAGPMTGDN GIYGQDQLSG
VQFAAKEIND SGGIPDGPLK GKKIKVVKFD DVADPNQGAS VAQKICDDTS IMAVFGHSNS
SVTLAAEPIY ERCGVPLFVS YSSNPEITAE LHENLFRTLI DDAKMGSEMA SFSHDQLGFK
KVGVIASDDD YGDGLKTNFN KTAEEIGLDV AKTVTTSAKQ KDFTPQLTEL RNAGADSLVL
LNTYTDAALQ IKQADAMGWD VPIFVTPGSN SPELVKIAGE KAAEGTIVAA VFDPNSSEPG
PAKFVNDFTA ANGKGPGESA AMSYDSFYVF LTSLEKGAKD RKSVIEKSAE IGTFTLPIRG
ELMFNETHEP TVVPGKPAQI LLQVKDGQIG SYAG
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