Gene Noca_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1827 
Symbol 
ID4597665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1948073 
End bp1948663 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content67% 
IMG OID639776427 
Productregulatory protein, TetR 
Protein accessionYP_923026 
Protein GI119716061 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA CGAAGGACAC CTCCCGCGCC GAGGCGACCC GAGCCCGCCT GGCCGAGGCC 
GCGGTGGACG CGTTCGCCGA ACGCGGCTAT CACGGCACCA CCACCCGGGA CATCGCCAGC 
GCAGCGGGGA TGTCCCCCGC CGCGCTCTAC GTGCACCACA ACTCGAAGGA GGAGCTCCTC 
TACCTCATCT CCAAGGCAGG CCATGAGCAG GCGCTGACCG TGCTCCGGCA GGCCGTCGAC 
GCCTCCGAGG ACCCGGTCGA GCAGTTGCGC GCAGTGATGC GTGGCTTCGT CGAACACCAC 
GTTCGCACGC ACACGTCGGC TCGGATCGTG AACTACGAAC TCGCCGCGCT TTCCCCGCAG 
CACCTTGCCG AGATGGCCGG AATACGCAGC GAGATCGACG CATTGTTCTC CGATCTGGTG 
AATCGCGGCA TCTCCACCGG CGCGTTCCAC ACGCGGTATC CGCGGATGGC CACGGTGGCG 
CTCCAGTCGC TCGGGATCGA CATCGCACGC TGGTACCGCG AAGGTGGCTG GTCGGAGGAG 
GAGATCGCCG ACGGCTACGT GGACATCGCG TTACGAATCG TCGGAGCGTG A
 
Protein sequence
MSDTKDTSRA EATRARLAEA AVDAFAERGY HGTTTRDIAS AAGMSPAALY VHHNSKEELL 
YLISKAGHEQ ALTVLRQAVD ASEDPVEQLR AVMRGFVEHH VRTHTSARIV NYELAALSPQ 
HLAEMAGIRS EIDALFSDLV NRGISTGAFH TRYPRMATVA LQSLGIDIAR WYREGGWSEE 
EIADGYVDIA LRIVGA