| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1808 |
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| Symbol | |
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| ID | 4597645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1922208 |
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| End bp | 1923923 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639776407 |
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| Product | trehalose synthase |
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| Protein accession | YP_923007 |
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| Protein GI | 119716042 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0813826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCAGG GGCTCACGCC GGACCCTCCT GAGAACAACC CCGACTGGTT CAAGAGCGCG
GTCTTCTACG AGGTCCTCGT CCGGTCCTTC CGCGACTCCA ACGCCGACGG CACCGGCGAC
TTCCGCGGGC TGGTCGAGCA GCTGGACTAC CTCCAGTGGC TCGGCGTGGA CTGCCTGTGG
ATCCCGCCGT TCTTCCCGAG CCCGCTGCGC GACGGCGGCT ACGACGTGGC GGACTACACC
GGGGTGCTCC CGGAGATCGG CACGATCGAG GACTTCCGCT ACTTCCTCGA CGAGGCGCAC
CAGCGCGGCC TGAAGGTCAT CATCGACTTC GTCATGAACC ACACGAGCGA CCAGCACCCG
TGGTTCCAGG CCTCCCGGTC CGACCCGCAG GGGCCGTACG GCGACTTCTA CGTCTGGTCC
GACACCGACG AGCTCTACGA GGAGGCGCGG ATCATCTTCG TCGACACCGA GCCGTCGAAC
TGGACGTGGG ACCCGGTCCG CCAGCAGTAC TTCTGGCACC GCTTCTTCTC CCACCAGCCC
GACCTCAACT TCGACAACCC CGCCGTCCAC GACGCGATGC TCGACGCGAT CCGGTTCTGG
CTCAACATGG GTCTGGACGG CTTCCGCCTC GACGCGGTGC CCTACCTCTA CGAGCGGCCG
GGCACCAACG GCGAGAACCT CCCTGAGACC CACGAGATGC TCAAGAAGGT CCGCAAGGTC
GTCGACGACG AGTACCCGGG CCGGATCCTC CTCTGCGAGG CCAACCAGTG GCCGCAGGAC
GTCGTGGAGT ACTTCGGCGA CTTCGCGGTG GGCGGTGACG AGTGCCACAT GGCCTTCCAC
TTCCCGGTGA TGCCGCGCAT CTTCATGGCG GTGCGCCGGG AGTCCCGGTT CCCGATCTCG
GAGATCCTCG AGCAGACCCC CGCGATCCCC GAGAACTGCC AGTGGGGCAT CTTCCTGCGC
AACCACGACG AGCTCACCCT CGAGATGGTC ACCGACGAGG ACCGCGACTA CATGTGGGGC
GAGTACGCCA AGGATCCCCG GATGAAGGCG AACATCGGCA TCCGCCGGCG GCTGGCGCCC
CTCCTCGACA ACGACACCAA CCAGATGGAG CTCTTCAACG CGCTGCTGTT CTCGCTGCCG
GGCTCCCCGG TCCTCTACTA CGGCGACGAG ATCGGCATGG GCGACAACAT CTGGCTCGGC
GACCGGGACG GGGTGCGCAC CCCGATGCAG TGGACCTCGG ACCGCAACGC CGGATTCTCC
TCGGCCAACC CCGGCAAGCT GGACCTGCCG CTCATCCAGG ACCCGGTCTT CGGGTACCAG
TCGGTCAATG TGGAGGCCCA GCTCGAGAAC ACCTCGTCCC TGCTGCACTG GATGCGCCGG
ATGATCCACG CCCGCCGCAA CCACCCCGCG TTCGGGCTCG GGACCTTCCA CGACCTGGGT
GGCTCGAACT CGACCGTGCT GTCCTACGTG CGGGAGTACA CCACCGAGGA CGGCTCCGAG
GACATCATCC TGTGCGTCAA CAACCTCTCC CGGTTCCCCC AGCCGGTCGA GCTGGACCTG
CGCCGGTTCG AGGGCCGGCG GCCCGTCGAG CTGATCGGTG GAGTCCCGTT CCCGGAGATC
GGCGAGCTGC CCTACCTCCT CACCCTGGCG GGGTACGGCT TCTACTGGTT CCGCCTGACC
GCTCCCGAGA CCAGCGAGGA GGGGCTGCTG CTGTGA
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| Protein sequence | MTQGLTPDPP ENNPDWFKSA VFYEVLVRSF RDSNADGTGD FRGLVEQLDY LQWLGVDCLW
IPPFFPSPLR DGGYDVADYT GVLPEIGTIE DFRYFLDEAH QRGLKVIIDF VMNHTSDQHP
WFQASRSDPQ GPYGDFYVWS DTDELYEEAR IIFVDTEPSN WTWDPVRQQY FWHRFFSHQP
DLNFDNPAVH DAMLDAIRFW LNMGLDGFRL DAVPYLYERP GTNGENLPET HEMLKKVRKV
VDDEYPGRIL LCEANQWPQD VVEYFGDFAV GGDECHMAFH FPVMPRIFMA VRRESRFPIS
EILEQTPAIP ENCQWGIFLR NHDELTLEMV TDEDRDYMWG EYAKDPRMKA NIGIRRRLAP
LLDNDTNQME LFNALLFSLP GSPVLYYGDE IGMGDNIWLG DRDGVRTPMQ WTSDRNAGFS
SANPGKLDLP LIQDPVFGYQ SVNVEAQLEN TSSLLHWMRR MIHARRNHPA FGLGTFHDLG
GSNSTVLSYV REYTTEDGSE DIILCVNNLS RFPQPVELDL RRFEGRRPVE LIGGVPFPEI
GELPYLLTLA GYGFYWFRLT APETSEEGLL L
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