Gene Noca_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1797 
Symbol 
ID4597709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1909823 
End bp1911013 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content71% 
IMG OID639776396 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_922996 
Protein GI119716031 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGTT CTGTCATCGT CGCGGGGGCA CGGACCCCCA TCGGACGCCT GCTCGGCGGG 
CTCAAGGGGC TCTCCGCGGC CGACCTCGGC GGCGTCGCCA TCAAGGCCGC GCTCGAGAAG
GCCGGCGTCA CCGGCGACCA GGTCGAGTAC GTGATCATGG GTCACGTGAT CCAGGCCGGG
GCCGGCCAGA TCACCGCCCG TCAGGCCTCG GTCAAGGGCG GCATCCCGAT GAACGTTCCC
GCCATCACGA TCAACAAGGT GTGCCTGTCC GGCATGAACG CGATCGCGCT CGCCGACCAG
CTGATCCGGG CCGGCGAGCA CGAGATCGTC GTCGCGGGCG GCATGGAGTC CATGACGCAG
GCGCCGCACC TGCTCCCCAA GTCCCGTGAG GGCTTCAAGT ACGGCGACAC CGCCCTGGTC
GACTCGATGG CCTACGACGC CCTCTACGAC CAGTTCACCG ACCAGCCGAT GGGCACGCTG
ACCGAGGCCT GCAACACGGG GGCCCGCGAG CTGACCCGCG AGGAGCAGGA CGCGTTCTCG
GCGCGCTCCC ACCAGCTCGC CGCTGCCGCG TGGAAGAACG GCGTCTTCGA CGACGAGGTG
GTCCCGGTCG AGATCCCGCA GCGCAAGGGC GATCCGGTCG TGATCGCGAA CGACGAGGGG
ATCCGCGGCG ACACCACGGC GGAGTCGCTC GGCAAGCTGC GCCCGGCGTT CAGCAAGGAC
GGCACGATCA CCGCCGGCTC CTCCTCGCAG ATCTCCGACG GCGCCTGCGC CGTGGTCGTG
ATGAGCAAGG CCAAGGCCGA GGAGCTGGGC CTCACCTGGC TCGCCGAGAT CGGCGCCTCC
GGTCAGGTCG CGGGCCCGGA CTCCAGCCTG CAGAGCCAGC CGGCCAACGC GATCAAGAAG
GCCGTCGCCA AGGAGGGCAT CTCCGTGGCG GACCTGGACC TGGTCGAGCT GAACGAGGCC
TTCGCGGCCG TCGGGATCGT GTCCGCCCGC GAGCTCGGGA TCCCCGAGGA GCAGGTCAAC
GTGAACGGTG GGGCGATCGC GCTGGGTCAC CCTGTCGGCA TGTCGGGCGC CCGGATCGTG
CTGCACCTCG CGCTCGAGCT CAAGCGCCGC GGTGGCGGGG TCGGCGCGGC CGCCCTGTGC
GGCGGCGGCG GGCAGGGCGA CGCCCTGATC GTGCGTGTCC CGAAGAGCTG A
 
Protein sequence
MSGSVIVAGA RTPIGRLLGG LKGLSAADLG GVAIKAALEK AGVTGDQVEY VIMGHVIQAG 
AGQITARQAS VKGGIPMNVP AITINKVCLS GMNAIALADQ LIRAGEHEIV VAGGMESMTQ
APHLLPKSRE GFKYGDTALV DSMAYDALYD QFTDQPMGTL TEACNTGARE LTREEQDAFS
ARSHQLAAAA WKNGVFDDEV VPVEIPQRKG DPVVIANDEG IRGDTTAESL GKLRPAFSKD
GTITAGSSSQ ISDGACAVVV MSKAKAEELG LTWLAEIGAS GQVAGPDSSL QSQPANAIKK
AVAKEGISVA DLDLVELNEA FAAVGIVSAR ELGIPEEQVN VNGGAIALGH PVGMSGARIV
LHLALELKRR GGGVGAAALC GGGGQGDALI VRVPKS