Gene Noca_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1793 
Symbol 
ID4597705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1905078 
End bp1906241 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content70% 
IMG OID639776392 
Producthypothetical protein 
Protein accessionYP_922992 
Protein GI119716027 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.116515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACT CCCCCCGGGA CACCCCGGAG GGAGACCTCG CCGCCACGAC CGAGGCGGCA 
GAGGACCCGG CCGACGCCGC CCTGGAGGCG GACCCCGCCG GCAGTGGCGA GTACCTCGGC
GAGCTCGGCG CGCCGCTCTC CCGGCACTCG CCGTTCGTGT GGGGATTCTT CGGCGGCCTG
GGCCTGTTCG TCGCCTGGTG GCTGGGCGGG CTGGTCGTCT CGATCGGCCC CACGCTGGTC
CTGGTGGTCG TGGCGCTGTT CCTCGCCGCG GGCCTCAACC CGGCGGTCGA GTTCTTCGAG
CGGCACGGCA TGCGCCGCCC GTACGCCGTA CTCACCGTCA TCGTGGCCGC GCTCGCCGCG
CTCGGACTGT TCCTCGTCGC GATCGTGCCC GTGATCACCG ACCAGGTGCA GTCGATCACC
GACAACGCGC CGGACTGGCT CGACAGCCTG CAGCAGAACC GCCGGATCCA AGAGCTCGAC
GCCGAGTACG ACGTGATCGA CAAGGTCAAG GAGTACGTCA GCGACGGCAA CTACGTCAGC
ACGCTGTTCG GCGGGGTGCT CGGCATCGGT CTGGCGGTGC TGTCCGCGCT GGCCAACGCC
TTCATCGTGA TCGTGCTGAC GCTGTACTTC CTCGCCTCCC TCGACAAGAC CAAGAAGGCG
CTCTACCAGC TCGCTCCGGC CTCGCGCCGC GAGCGGGTCG CCCTGCTCGG CGACCGGGTG
CTGCGCGGGG TCGGCGGCTA CGTCTCCGGC GCCTTCATCG TCGCGATGTG CGCCGGCATC
TCGTCCCTGG TCTTCCTGTT CATCGTCGGG CTCGGGCAGT ACGCCGTCGC GCTGGCCTTC
GTGGTGGCGC TGCTCGACGT GATCCCGATG ATCGGCGCGA CCATCGGCGC GGTCGTCGTG
ACGGCGATCG GCTTCGCCGA GGACCCGAGG ATCGGGATCG CCTGCATCGT CTTCTACGTC
ATCTACCAGC AGGTGGAGAA CTACGTGATC TACCCCCGGG TGATGTCCCG CTCCGTCGAC
GTCCCCGGCG CCGTCACCGT CATCGCCGCG CTCGTGGGCG CGGCCCTGCT CGGCGTGGTC
GGCGCGTTGC TCGCCATCCC CACCGCCGCC GCCATCTTGA TGCTCACCCG CGAGGTCGTC
GTCCGCCGCC AGGACGCCCG CTGA
 
Protein sequence
MTDSPRDTPE GDLAATTEAA EDPADAALEA DPAGSGEYLG ELGAPLSRHS PFVWGFFGGL 
GLFVAWWLGG LVVSIGPTLV LVVVALFLAA GLNPAVEFFE RHGMRRPYAV LTVIVAALAA
LGLFLVAIVP VITDQVQSIT DNAPDWLDSL QQNRRIQELD AEYDVIDKVK EYVSDGNYVS
TLFGGVLGIG LAVLSALANA FIVIVLTLYF LASLDKTKKA LYQLAPASRR ERVALLGDRV
LRGVGGYVSG AFIVAMCAGI SSLVFLFIVG LGQYAVALAF VVALLDVIPM IGATIGAVVV
TAIGFAEDPR IGIACIVFYV IYQQVENYVI YPRVMSRSVD VPGAVTVIAA LVGAALLGVV
GALLAIPTAA AILMLTREVV VRRQDAR