Gene Noca_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1789 
Symbol 
ID4597701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp1901785 
End bp1902531 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content73% 
IMG OID639776388 
Productsecreted protein 
Protein accessionYP_922988 
Protein GI119716023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.546813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGCCC TGGTCGCGGT GATCCCGGCC ACGGCCAGCG CCGACCCGCC ACCCGTGACA 
CCGCTGCCCA CCGGCACCGA CGTCGACTAC CAGCTGGGCG GCGCCGCCGA GATGCCCGAC 
CACGTCGGGA TCGTGGTGCG GGACCGGACG GACAGCCCCG CGGACGGGCG GTACAACGTC 
TGCTACGTCA ACGGCTTCCA GACCCAGCCG GACCAGCGCA GGTTCTGGAA GCGGCACTGG 
CGCCTGGTGC TGAAGGACGG CGGCGAGCCG GTCGCGGACG AGGCGTGGGG CGAGTGGCTG 
CTCGACGTAC GAACCGAGGC GAAGCGGGCG GACCTGGCCC GTGTCGTCGG GCGCTGGGTC 
CGCGGCTGTG CCGCCGACGG CTTCGACGCC GTCGAGTACG ACAACCTGGA CTCGTTCACC 
CGCAGCCACC GGCTGGTCGC GCGCCGGCAG GCGCTCGCCT ACGCGCGCCT GCTCGTCCGC 
GCGGGGCACC GGGCCGGCCT CGCGGTCGGG CAGAAGAACC TCGCGGGGTA CGACGGCACC 
GCGATCGGCT ACGACTTCGC CGTCGCCGAG GAGTGCGGCC GCTACCGCGA GTGCGCCTCG 
TACGTGCGGC ACTACGGTGA CCGGGTGCTG GCGATCGAGT ACCGGCGCGC CAACTTCCGG 
TGGACCTGTG CCCACGTCGG CGATCGGCTG GCGGTCGTCC TCCGCGACCG TGACCTGACC 
CCGACGGGAG TGCACGAGTG GTGCTGA
 
Protein sequence
MLALVAVIPA TASADPPPVT PLPTGTDVDY QLGGAAEMPD HVGIVVRDRT DSPADGRYNV 
CYVNGFQTQP DQRRFWKRHW RLVLKDGGEP VADEAWGEWL LDVRTEAKRA DLARVVGRWV 
RGCAADGFDA VEYDNLDSFT RSHRLVARRQ ALAYARLLVR AGHRAGLAVG QKNLAGYDGT 
AIGYDFAVAE ECGRYRECAS YVRHYGDRVL AIEYRRANFR WTCAHVGDRL AVVLRDRDLT 
PTGVHEWC