| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1785 |
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| Symbol | |
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| ID | 4597697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1896989 |
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| End bp | 1898470 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639776384 |
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| Product | major facilitator transporter |
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| Protein accession | YP_922984 |
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| Protein GI | 119716019 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTCG AAACCGGTCG GATCACCACC GACATCCCCG CGCGTCTGGA CCGGCTCCCG
TGGGCCCGGT GGCACTGGCT GGTCGTGATC GGACTCGGCA CGGTCTGGAT CCTGGACGGC
CTCGAGGTCA CCATCGTCGG CTCGATGTCG GACGCCCTCA AGCCCGACGG CACCGGCCTG
GGCATGAACA ACTTCGACAT CGGCCTCGCG GGCTCGATGT ACGTCGCCGG TGCCTGCCTC
GGCGCCCCCT TCTTCGGGCA GCTCACCGAC CGGCTCGGCC GCAAGAAGCT GTTCATCGTC
ACGCTCGCGG TCTACACCGT GGCCACCGTG CTGACGGCGT TCTCGATGAA CCCGATGTGG
TACTTCGCCT GCCGCTTCCT GACCGGTTGC GGCATCGGCG GTGAGTACGC CGCGATCAAC
TCCGCCATCG ACGAGCTGAT CCCCGCGAAG TACCGCGGTC GCGTCGACAT CGCCATCAAC
GGCTCGTTCT GGGTCGGTGC GGCCGGGGGC GCGCTGCTGA CGATCCCGCT GCTCGACCCG
ACGATGATCG ACCAGTCCTG GGGCTGGCGG CTCGCCTTCG GCCTGGGCGC GATCCTCGCC
GTCGGCATCC TGGTCGTCCG GCGCAACGTC CCGGAGAGCC CGCGCTGGTT GTTCATCCAC
GGCCGCGAGG ACGAGGCGGA GCAGATCGTC CGCGACATCG AACGCACCGT CTCCGAGGAG
TCCCACCACC AGCTGCACGA CGTGCACGAC ACGATCACGG TGCGGCAGCG CACGTCGATC
GGCATCGGCC TGATCGCGAG GACGGTCTTC ACCCTGTACC CGAAGCGGAC GATCCTGTGC
TTCTCGCTGT TCGTCGGGCA GGCGTTCTTG TACAACGCCT TCTTCTTCAC CTACGGCGAC
ACCCTGACGA CCTTCCTCGG CGTGGAGCAG ACCGGCTACT ACATCGCGGT GTTCGCGGCG
AGCAACTTCG CCGGGGCGCT GCTGCTGAGC CCGCTGTTCG ACACCCTGGG CCGGGTCAAG
ATGATCACCG CGACCTACAT CGGGTCCGGG GTCCTGCTCG CCGTGACCGG CTTCTACCTG
GGCAGCTTCG ACGCCACCAC CCTCACGCTG ATGGGCGCGA TCATCTTCTT CATGGCCTCG
GCCGGCGCGA GTGCGGCGTA CCTCACCGCC AGCGAGGTGT TCCCGATGGA GACCCGGGCC
CTGTGCATCG CGTTCTTCTA CGCGATCGGC ACCGCGGCCG GCGGCATCTC CGGCCCGCTG
TTCTTCGGCT GGCTGATCGA GCAGGCCTCG GCGGACAAGG ACATCACGCA GATCGCGGTC
GGCTACTTCC TCGGCGCCGC GCTGATGATC ATCGGTGGCA TCGTCGAGGC GTTCCTGGGC
GTCAAGGCGG AGGGCAAGTC GCTGGAGAGC ATCGCCCAGC CGCTCACCGC CGAGGACACC
GACACCGGTA GCACCGGCTC CACGCAGCCA CAGCACGCCT GA
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| Protein sequence | MAVETGRITT DIPARLDRLP WARWHWLVVI GLGTVWILDG LEVTIVGSMS DALKPDGTGL
GMNNFDIGLA GSMYVAGACL GAPFFGQLTD RLGRKKLFIV TLAVYTVATV LTAFSMNPMW
YFACRFLTGC GIGGEYAAIN SAIDELIPAK YRGRVDIAIN GSFWVGAAGG ALLTIPLLDP
TMIDQSWGWR LAFGLGAILA VGILVVRRNV PESPRWLFIH GREDEAEQIV RDIERTVSEE
SHHQLHDVHD TITVRQRTSI GIGLIARTVF TLYPKRTILC FSLFVGQAFL YNAFFFTYGD
TLTTFLGVEQ TGYYIAVFAA SNFAGALLLS PLFDTLGRVK MITATYIGSG VLLAVTGFYL
GSFDATTLTL MGAIIFFMAS AGASAAYLTA SEVFPMETRA LCIAFFYAIG TAAGGISGPL
FFGWLIEQAS ADKDITQIAV GYFLGAALMI IGGIVEAFLG VKAEGKSLES IAQPLTAEDT
DTGSTGSTQP QHA
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