| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1784 |
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| Symbol | |
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| ID | 4597696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1895023 |
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| End bp | 1896849 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639776383 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_922983 |
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| Protein GI | 119716018 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.819924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGCA TGACCAGCAC CTCCCCCGAG ACAGCCGCTC CCGGAGCCGG GCGCGAGTTC
CGCACGATCG GCGTCATCGG CCTGGGCACC ATGGGTGCCG GCATCGCCGA GGTCTTCGCC
CGGGCCGGCC ACGCCGTGGT CGGCGTCGAG AAGGACGACG AGTCCCTGGC CCGTGGCCGC
CAGTACCTCG AGCACTCGAC CTCCCGCGCC GTCAAGCGCG AGAAGATGAC CGAGGCGGAC
CAGGCCGAGC TGCTGGGGCG GATCACGTTC ACCACCTCGC TCAAGGACCT CGCCGAGGCG
GACTTCGTCG TCGAGGCGGT GGTGGAGTCG CTCGAGACCA AGAAGGCGAT CTTCCGCGAC
CTCGACGAGA TCGTCTCGCC CGAGACGATC CTGGCCACGA ACACGTCCTC GCTCTCGGTC
ACCGAGATCT CGACCGCCAA CGGCAGCCCG GGCCGCGTGG TCGGCGTGCA CTTCTTCAAC
CCGGCGCCGG TGCAGGCGCT GGTCGAGATC GTGCGCACCG TCGTGACCGA GCAGAGCGTC
CTCGACGAGA CCACCGCGCT GGTCACCAGC CTCGGGAAGG CCCCGGTCGT CTGCGGCGAC
AAGGCGGGCT TCATCGCCAA CACGCTGCTC TTCGGCTACC TCAACCACGC GGTCGCCATG
TACGAGGGCC ACTACGCCTC GCGCGAGGAC ATCGACGCCG CGATGCGGTA CGGCTGCGGC
TACCCGATGG GCCCGCTCGC GCTGCTCGAC CTGATCGGCC TGGACACGGC GTACGAGATC
CTCGAGACCA TGTACCACCA GGGCCGCGAC CGGCTGCACG CGCCGCGCCC GATCCTCAAG
CAGATGGTCA CCGCGGGCAT GCTCGGCCGC AAGACCGGCC GTGGGTTCTA CTCCTACGAG
GCCGCGGACA GCCCGGTCGT CGTCGCCGAC GAGCTGACCC CGTCGGTGGA CCAGAAGCCC
CAGCTGCGAC ACGACATCAA GCTGGTCGGG GTGGTCGGCA CCGGCACGAT GGCCACCGGC
ATCGTCGAGG TCTTCGCCAA GAGCGGGTAC GACGTGCTCT ACGTCGGCCG CTCCGCCGAC
AAGGTCGCGG GCGTCCGCGC CGCGATCGAG AAGTCGCTCG ACAAGGCCAT CCAGCGCGGC
AAGCTCGAGG AGTCCGCCAA GGCGGAGGTG CTCGGCCGAC TGACCGGCAG CACCTCGCTG
GACGACCTCG CGCCGGTCGA CATCGTGGTC GAGGCGATCG CCGAGGACCT GGCGATCAAG
TCCACGCTCT TCGCGAACCT CGACGAGATC TGTCGACCGG GCGCGATCCT GGCGACCACC
ACCTCCTCGC TGCCGGTCAT CGAGTGCGCC CAGGCCACCG CGCGCCCGCA CGACGTCATC
GGGATACACT TCTTCAACCC GGCGCCGGTG ATGAAGCTGG TCGAGGTCGT CTCGACGGTC
GTCACGTCCG ACGAGGTCAC CGAGACGACG CGGGCGCTGT GCGACCGGGT CGGCAAGGTC
GCCGTCTCGT GCGGCGACCG GGCCGGCTTC ATCGTCAACG CGCTGCTGTT CCCCTACCTC
AACGACGCGG TGAAGATGCT CGAGGCGCAC TACGCCACCG CCGACGACAT CGACCTCGCG
ATGAAGCAGG GCTGCGCGCT GCCGATGGGC CCGTTCGAGC TGCTCGACGT GGTCGGCAAC
GACGTGTCCC TCGCGATCCA GCGCGAGCTC TACCTCGAGT TCCGCGAGCC CGGCTTCGCC
CCCGCGCCGT TGCTGGAGCA CCTGGTCACC GCCGGCTACC TCGGCCGCAA GACCAAGCGC
GGGTTCCGCG ACTACTCTGC TCGCTAG
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| Protein sequence | MPRMTSTSPE TAAPGAGREF RTIGVIGLGT MGAGIAEVFA RAGHAVVGVE KDDESLARGR
QYLEHSTSRA VKREKMTEAD QAELLGRITF TTSLKDLAEA DFVVEAVVES LETKKAIFRD
LDEIVSPETI LATNTSSLSV TEISTANGSP GRVVGVHFFN PAPVQALVEI VRTVVTEQSV
LDETTALVTS LGKAPVVCGD KAGFIANTLL FGYLNHAVAM YEGHYASRED IDAAMRYGCG
YPMGPLALLD LIGLDTAYEI LETMYHQGRD RLHAPRPILK QMVTAGMLGR KTGRGFYSYE
AADSPVVVAD ELTPSVDQKP QLRHDIKLVG VVGTGTMATG IVEVFAKSGY DVLYVGRSAD
KVAGVRAAIE KSLDKAIQRG KLEESAKAEV LGRLTGSTSL DDLAPVDIVV EAIAEDLAIK
STLFANLDEI CRPGAILATT TSSLPVIECA QATARPHDVI GIHFFNPAPV MKLVEVVSTV
VTSDEVTETT RALCDRVGKV AVSCGDRAGF IVNALLFPYL NDAVKMLEAH YATADDIDLA
MKQGCALPMG PFELLDVVGN DVSLAIQREL YLEFREPGFA PAPLLEHLVT AGYLGRKTKR
GFRDYSAR
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