Gene Noca_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1782 
Symbol 
ID4597694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1892572 
End bp1893252 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content70% 
IMG OID639776381 
Producthypothetical protein 
Protein accessionYP_922981 
Protein GI119716016 
COG category[L] Replication, recombination and repair 
COG ID[COG1637] Predicted nuclease of the RecB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.202038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGTGA GATTGGTCGT TGCCCGCTGC CAGGTCGACT ACGCCGGGCG GCTGACCGCC 
CACCTGCCAA TGGCGACCCG GGTCCTGATG ATCAAGGCCG ACGGCTCCGT GCTCGTGCAC 
TCCGACGGCG GCTCGTACAA GCCGCTGAAC TGGATGTCCC CGCCGTGCAT CCTGCGCGAG 
GGCACGACCG ACGACGGCCG GGTCGAGTGG ACCGTGATCT CCAAGAACGA CGACACGCTG 
CGGATCCTGA TCGAAGAGGT CCTCCACGAG TCGATCCACG AGCTGGGCGT CGACCCGGGC 
CTCCAGAAGG ACGGCGTGGA GAAGCACCTC CAGGAGATGC TGGCCGAGCA CCCGGCGACC 
CTCTCCCCCG GCCTCACGCT GGTCCGGCGG GAGTACCCCA CCGCGATCGG GCCGGTGGAC 
CTGATGTGCA AGGACGCCGA GGGCCGCAAC GTCGCCGTCG AGATCAAGCG CCGCGGCGAC 
ATCGACGGCG TCGAGCAGCT CACCCGCTAC CTCGAGCTGT TGAACCGGGA CCCGCTGCTG 
GCACCCGTGC GCGGCATCTT CGCCGCACAG GAGATCAAGC CCCAGGCGCG GGTCCTCGCC 
ACCGACCGCG GCATCGCCTG CGCGGTGGTC GACTACGACG CGCTGCGCGG CCTCGACGAC 
CCGACCCACC GACTGTTCTG A
 
Protein sequence
MLVRLVVARC QVDYAGRLTA HLPMATRVLM IKADGSVLVH SDGGSYKPLN WMSPPCILRE 
GTTDDGRVEW TVISKNDDTL RILIEEVLHE SIHELGVDPG LQKDGVEKHL QEMLAEHPAT 
LSPGLTLVRR EYPTAIGPVD LMCKDAEGRN VAVEIKRRGD IDGVEQLTRY LELLNRDPLL 
APVRGIFAAQ EIKPQARVLA TDRGIACAVV DYDALRGLDD PTHRLF