| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1747 |
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| Symbol | |
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| ID | 4597929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1857894 |
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| End bp | 1859630 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639776347 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_922947 |
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| Protein GI | 119715982 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.179757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGG CTCAGCTGGT CGAGGCGATC AAGGCCCACC AGAGCGGCGG CCGGCCGGCC
AAGGAGCGCG GCGAGCAGCA GCAGGCCCAG CAGGAGCGGA GCGAGCAGCA GCGGACCCAG
CCGGAACAGG CCCCGCAGGA GCGGACCCAG CCGGAGCGAC CGCAGCAGCA GCGGTCGGAG
GAGCAGCCGC GGCGCGACCA GCGGCCCGAC GAGGCCCAGC GGGACCAGCA GCGGGACCAG
CAGCGCGAGC GCAACCGCGG CCAGGGTCAG GGGAACCACG ACCAGAAGCA GGACCAGAAC
AAGCAGGGCC AGCCCAAGCG GCAGGACCAG AAGCAGGCCC AGAACAAGCA GGACCAGAAG
CAGGACCAGG GCAAGCAGGA CCAGAAGCAG GACCAGGGTC ACCAGGATCA GGACCATCAC
GACCAGGGAC ACCAGGACCA GGGGCACCAG GACCAGGGCC GGGCGGGCGA GGACCAGGGT
GAGGGCAGTC GCCGCAACCG GCGGCGTCGC GGTCGCGACC GTGACCGTAC CGGTCGGGGG
GTCACCGGCG GTGGTCAGCG CAACGAGCCG GACACCACGA TCCTCGAGGA CGACGTCCTG
GTGCCGGCCG CGGGCATCCT CGACGTTCTC GACAACTACG CGTTCGTGCG GACCAGCGGC
TACCTCCCCG GCCCTGACGA CGTGTACGTG TCGCTCTCGA TGGTGCGCAA GTTCGGGCTG
CGCCGCGGCG ACGCGCTCGT CGGGCAGGTG CGCCAGCCCC GGGAGGGCGA GCGCAAGGAG
AAGTTCAACC CGATGGTCCG CATCGACAGC GTCAACGGCG CCGATCCGGA GATCGCGAAG
GGGCGGGTCG ACTTCGCCAA GCTGACCCCG CTCTACCCCT CCGAGCGGTT GCGGCTGGAG
ACCGAGCCGA CGAACCTGAT CGGTCGGGTC ATCGACATCG CGGCCCCGAT CGGCAAGGGC
CAGCGCGGCC TGATCGTGTC CCCGGCGAAG GCCGGCAAGA CCATGATCAT GCAGTCGATC
GCGAACTCGA TCACCACCAA CAACCCCGAG TGCCACCTGA TGGTGGTGCT GGTCGACGAG
CGGCCCGAGG AGGTCACCGA CTTCGAGCGC TCGGTCAAGG GTGAGGTCAT CTCCTCGACC
TTCGACCGTC CGGCCAGCGA CCACACGATG GTCGCCGAGC TCGCCATCGA GCGGGCCAAG
CGGCTGGTCG AGCTCGGCCA CGACGTCGTC GTACTGCTCG ACGGCATCAC CCGGTTGGGG
CGCGCCTACA ACCTCGCGAT GCCGGCGAGC GGCCGGATCC TCTCCGGTGG TGTGGACTCG
GCCGCGCTCT ACCCACCGAA GAAGTTCTTC GGTGCGGCGC GCAACATCGA GAACGGCGGC
TCGCTGACCA TCCTCGCCAC GGCCCTGATC GAGAGCGGCT CGAAGATGGA CGAGGTGATC
TTCGAGGAGT TCAAGGGCAC CGGGAACATG GAGATCCGGT TGCGCCGCGA CCTTGCCGAC
AAGCGACTGT TCCCCGCGAT CGACGCGGTC CAGTCCGGCA CCCGCCGCGA GGAGCTCCTG
ATGAGCAAGG AGGAGCTGGC CATCGTCTGG AAGCTGCGCC GGGTGCTCTC CGGGCTCGAC
GGCCAGCAGG CGCTCGAGCT CCTGCTGGAG CGGCTGAAGA AGTCCCAGAC CAACATCGAG
TTCCTGATGC AGGTCCAGAA GACGACCCCG ACCCCGACCG GCGGGCGCGA AGACTGA
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| Protein sequence | MKKAQLVEAI KAHQSGGRPA KERGEQQQAQ QERSEQQRTQ PEQAPQERTQ PERPQQQRSE
EQPRRDQRPD EAQRDQQRDQ QRERNRGQGQ GNHDQKQDQN KQGQPKRQDQ KQAQNKQDQK
QDQGKQDQKQ DQGHQDQDHH DQGHQDQGHQ DQGRAGEDQG EGSRRNRRRR GRDRDRTGRG
VTGGGQRNEP DTTILEDDVL VPAAGILDVL DNYAFVRTSG YLPGPDDVYV SLSMVRKFGL
RRGDALVGQV RQPREGERKE KFNPMVRIDS VNGADPEIAK GRVDFAKLTP LYPSERLRLE
TEPTNLIGRV IDIAAPIGKG QRGLIVSPAK AGKTMIMQSI ANSITTNNPE CHLMVVLVDE
RPEEVTDFER SVKGEVISST FDRPASDHTM VAELAIERAK RLVELGHDVV VLLDGITRLG
RAYNLAMPAS GRILSGGVDS AALYPPKKFF GAARNIENGG SLTILATALI ESGSKMDEVI
FEEFKGTGNM EIRLRRDLAD KRLFPAIDAV QSGTRREELL MSKEELAIVW KLRRVLSGLD
GQQALELLLE RLKKSQTNIE FLMQVQKTTP TPTGGRED
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