| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1737 |
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| Symbol | kgd |
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| ID | 4598499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1841727 |
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| End bp | 1845518 |
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| Gene Length | 3792 bp |
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| Protein Length | 1263 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639776336 |
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| Product | alpha-ketoglutarate decarboxylase |
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| Protein accession | YP_922937 |
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| Protein GI | 119715972 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.765927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCATT CCCCAGGCAG TCAGTCCGAC GTCCCCGCCC AGCAGTTCGA GGGGGCCGAC
TTCGGCGCCA ACGAGTGGCT GGTCGAGGAG ATGTTCGACC AGTACCAGCA GGACCCGGAC
AGCGTCGACG CTACCTGGGC CGAGTACTTC CGGGCCACCG GCTCCGGCGC GGGCACCAAC
GGTACGTCGC AGCCCGCCGC CCGCGCCAGC GCGCCCGCCC AGCCGGCCGC CGCGCCGGCC
CCGAAGCCGG CCCAGCAGCC CGCGCAGCAG GCGGCCCCGC AGCCCGCCCA GCAGCCCGCC
GGGCAGCCCG CGCAGGACAC CGCCGCCAAG CCGGCGCCGG CCCCCGTGGC CAAGCCGCGG
CACACCGCGA AGGCCGCCGA GCCGGCCAAG GGCACGGCCA ACCCGGTGCC CAAGGAGTCG
CGTCCCGCGA CCCCCGCGCC GACCACCGAC CAGCCGACCT ACACCGTGCT GCGCGGCGCG
CCCGCGCGGA CCGCGCAGAA CATGGACGCC TCGCTGACCG TGCCGACGGC GACCTCGGTG
CGCTCGGTCC CGGTGAAGCT GCTGTGGGAC AACCGCACGG TCATCAACAA CCACCTCGCC
CGGGCCCGCG GCGGCAAGGT GTCGTTCACC CACCTGATCG GCTACGCGCT GGTCAAGGCC
GTCCGCACCA TGCCCGAGAT GAACGTCGGG TTCGACACCG TCGACGGCAA GCCCAACCAG
ATCACCCCGG CGCACATCAA CCTCGGCCTC GCGATCGACC TGCAGAAGTC CGACGGCACG
CGGCAGCTGG TGGTGCCGAA CATCAAGTCG GCCGAGACGA TGGACTTCGC CGGGTTCTGG
ACCGCCTACG AAGAGATCGT GCGCAAGGCC CGCGACAACA AGCTCACGGT CGAGGACTTC
CAGGGCACGA CGATCAGCCT GACCAACCCC GGGGGCATCG GCACCAGCCA CTCGGTGCCG
CGGTTGATGA AGGGCCAGGG CGCGATCGTC GGCGTCGGCG CCATGGAGTA CCCGCCCGAG
TGGCAGGGCG CCTCCGAGGA CGCGATCGCA CGCAACGCGA TCAGCAAGGT GATGACCCTC
ACCTCGACGT ACGACCACCG GGTCATCCAG GGCGCGCAGT CCGGCGAGTT CCTCAAGCGC
GTGCACCAGC TGCTGCTGGG CCAGAACGGC TTCTACGACG AGATCTTCCG GTCCCTGCGG
ATCCCCTACG AGCCGATCCG CTGGGCCAGC GACATCTCCA CCAGCCACGA CGACGAGATC
AGCAAGCAGG CCCGGATCCT CGAGTTGATC CACGCCTACC GCGTGCGCGG CCACATGATG
GCCGACACCG ACCCGCTGGA GTACCGCCAG CGCAGCCACC CCGACCTCGA GGTGGAGTCA
CACGGGCTGA CCCTGTGGGA CCTCGACCGT GAGTTCGCGA CCGGCTCGTT CGGTGGCGAG
GGCCGCCGGT TCATGAAGCT GCGCCAGATC CTGGGGATCC TGCGCGACTC CTACTGCCGG
ACCATCGGCA TCGAGTACAT GCACATCATG GACCCCGAGC AGCGCCGGTG GCTCCAGGAG
CGCATCGAGG TGCCGCACAC CAAGCCGCCG CGCGAGGAGC AGCTGCGGAT CCTGCTCAAG
CTCAACCAGG CCGAGGCGTT CGAGACGTTC CTGCAGACGA AGTTCGTCGG CCAGAAGCGC
TTCTCCCTCG AGGGCGGCGA GACCACGATC CCGGTGATCG ACGAGATCTG CGAGGCCGCC
GCCGAGGCGG CGCTCGACGA GGTCGCGATC GGCATGGCCC ACCGCGGCCG GCTCAACGTG
CTCGCCAACA TCGTCGGCAA GAAGTACTCC CAGATCTTCC GCGAGTTCGA GGGCAACATC
GACCCGCGCA CCGTCCAGGG CTCCGGCGAC GTGAAGTACC ACCTCGGCGC CGAGGGCGAG
TTCGAGGCGG GCTCGAAGGA CCGGATCAAG GTCTCGGTCG CCGCGAACCC CTCCCACCTC
GAGGCGGTCG ACCCGGTGCT CGAGGGCATC GCGCGCGCCA AGCAGGACGT CCTGGACCGC
GGCGCGGCGT ACCCCGTGCT CCCGCTGCTG GTGCACGGCG ACGCGGCCTT CGCGGGCCAG
GGCGTGGTCG CGGAGACACT CAACCTCTCC CAGCTGCGCG GCTACCGCAC CGGCGGCACC
ATCCACGTGG TCGTCAACAA CCAGGTCGGG TTCACCACCT CGCCCGGCTC CTCGCGCTCC
TCGCTCTACG CCACCGACGT GGCGCGGATG GTGCAGGCCC CGATCTTCCA CGTGAACGGT
GACGACCCCG AGGCCTGCAT CCGGGTCTCC CGGCTGGCCT TCGAGTACCG GCAGGCGTTC
AACAAGGACG TCGTCATCGA CCTCGTCTGC TACCGCCGCA GGGGCCACAA CGAGGGCGAC
GACCCGTCGT ACACCCAGCC GCTCATGTAC GACCTGATCG AGCAGAAGCG CTCGGTCCGC
AAGCTCTACA CCGAATCCCT CATCGGTCGT GGCGACATCA CGATCGAGGA GGCCGAGCAG
GTGCTCCGCG ACTACCAGCA GCAGCTGGAG CGGGTCTTCA CCGAGGTCCG CGAGGCCAGT
TCGCAGCCCT CGGAGTGGAC CACGGTCCCG GACTACCCGG AGAAGCCGGT CGGGCAGGCC
CAGACCGCCG TCGGGCCGGA CGTCCTCAAG CGGATCGCCG ACGCCTACGT CACCCCGCCC
GAGGGCTTCA CCGTGCACCC CAAGGTGATG CCGCAGCTGC AGCGGCGGGC CGCGGCCATC
GCCGACGGCC CGATCGACTG GGGCACCGGT GAGGTGCTCG CGTTCGGCTC GCTGCTGATG
GAGGGCCGGC CGGTGCGGCT GGCCGGCCAG GACTCGCGGC GCGGCACGTT CGTGTCGCGG
TTCGGCACCA TCATCGACCG GGTCAACGCC GACGAGTGGA CGCCGCTGTC CTCGCTCACC
GAGGACCAGG CGAAGTTCTA CATCTACGAC TCGCTGCTCT CCGAGTACGC CGCCCTCGGC
TTCGAGTACG GCTACTCCGT GGCTCGGCCC GAGGCGCTGG TGCTGTGGGA GGCGCAGTTC
GGCGACTTCG TCAACGGCGC CCAGACCGTG ATCGACGAGT TCATCACCTC CGGCGAGAGC
AAGTGGGGCC AGCAGTCCGG CGTCGTGCTG CTGCTGCCGC ACGGCTACGA GGGCCAGGGC
GCCGACCACT CCTCGGCGCG CATCGAGCGG TTCCTGACGA TGGCGGCCGA CGAGGCGTTC
GTGGTCGCCC AGCCGTCGAC TCCGGCGTCG TACTTCCACC TGCTGCGCCA GCACTCGCTG
GGCGAGGAGC ACCGCCCGCT GATCGTCTTC ACCCCGAAGT CGATGCTCAA GCGCAAGGAC
GCCGCCTCGC ACCCAGGCGA ATTCACCTCG GGCACGTTCC GGCCGTTCAT CACCGACGAC
CAGGCCGATC CCGACCAGGT GGACACGCTG CTGCTGTGCT CGGGCCGGGT GACCTGGGAC
CTGATGGTCG AGCGCGGCAA GCGCGAGGAC GGCGGGCGCT TCGCGATCGC CCGGGTCGAG
CAGCTCTACC CGCGCCCCGA GGCCGAGATC CGCGAGGAGA TCGCCCGCTT CCCCAAGCTC
AAGGCGGTCC GCTGGGTCCA GGACGAGCCC GCGAACATGG GGCCGTGGCC GCACTACCAG
CTCGCCGTGT GGCCGCACGT CGACGCCCGC GTCGAGCTGG TCTCGCGGCC CGAGTCCTCC
TCCCCCGCCG TCGGCACGGT CAAGCGGCAC ACCGAGGAGC AGAAGGACCT GATCCAGAGG
GCGTTCGCCT GA
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| Protein sequence | MPHSPGSQSD VPAQQFEGAD FGANEWLVEE MFDQYQQDPD SVDATWAEYF RATGSGAGTN
GTSQPAARAS APAQPAAAPA PKPAQQPAQQ AAPQPAQQPA GQPAQDTAAK PAPAPVAKPR
HTAKAAEPAK GTANPVPKES RPATPAPTTD QPTYTVLRGA PARTAQNMDA SLTVPTATSV
RSVPVKLLWD NRTVINNHLA RARGGKVSFT HLIGYALVKA VRTMPEMNVG FDTVDGKPNQ
ITPAHINLGL AIDLQKSDGT RQLVVPNIKS AETMDFAGFW TAYEEIVRKA RDNKLTVEDF
QGTTISLTNP GGIGTSHSVP RLMKGQGAIV GVGAMEYPPE WQGASEDAIA RNAISKVMTL
TSTYDHRVIQ GAQSGEFLKR VHQLLLGQNG FYDEIFRSLR IPYEPIRWAS DISTSHDDEI
SKQARILELI HAYRVRGHMM ADTDPLEYRQ RSHPDLEVES HGLTLWDLDR EFATGSFGGE
GRRFMKLRQI LGILRDSYCR TIGIEYMHIM DPEQRRWLQE RIEVPHTKPP REEQLRILLK
LNQAEAFETF LQTKFVGQKR FSLEGGETTI PVIDEICEAA AEAALDEVAI GMAHRGRLNV
LANIVGKKYS QIFREFEGNI DPRTVQGSGD VKYHLGAEGE FEAGSKDRIK VSVAANPSHL
EAVDPVLEGI ARAKQDVLDR GAAYPVLPLL VHGDAAFAGQ GVVAETLNLS QLRGYRTGGT
IHVVVNNQVG FTTSPGSSRS SLYATDVARM VQAPIFHVNG DDPEACIRVS RLAFEYRQAF
NKDVVIDLVC YRRRGHNEGD DPSYTQPLMY DLIEQKRSVR KLYTESLIGR GDITIEEAEQ
VLRDYQQQLE RVFTEVREAS SQPSEWTTVP DYPEKPVGQA QTAVGPDVLK RIADAYVTPP
EGFTVHPKVM PQLQRRAAAI ADGPIDWGTG EVLAFGSLLM EGRPVRLAGQ DSRRGTFVSR
FGTIIDRVNA DEWTPLSSLT EDQAKFYIYD SLLSEYAALG FEYGYSVARP EALVLWEAQF
GDFVNGAQTV IDEFITSGES KWGQQSGVVL LLPHGYEGQG ADHSSARIER FLTMAADEAF
VVAQPSTPAS YFHLLRQHSL GEEHRPLIVF TPKSMLKRKD AASHPGEFTS GTFRPFITDD
QADPDQVDTL LLCSGRVTWD LMVERGKRED GGRFAIARVE QLYPRPEAEI REEIARFPKL
KAVRWVQDEP ANMGPWPHYQ LAVWPHVDAR VELVSRPESS SPAVGTVKRH TEEQKDLIQR
AFA
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