Gene Noca_1729 details

Gene Information

• Locus tag: Noca_1729
• ID: 4598491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1837706
• End bp: 1838389
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 639776328
• Product: short chain dehydrogenase
• Protein accession: YP_922929
• Protein GI: 119715964
• COG category: [R] General function prediction only
• COG ID: [COG0300] Short-chain dehydrogenases of various substrate specificities

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCACC TCCTCACCGG GGCCGGGTCG GGCATCGGCG CGGAGCTGGC CCGCCGGCTG 
CACGAGCGCG GCGACGACCT GGTCCTGCTG GCGCGCTCAC CGGAGCGGGC GGCGGAGCTG 
CGCACGGCCT ACGCCGGCGC GACGGTCCTC GTGGCCGACC TGGCCCGGCC GGAGTCCGTG 
GAGTCGCTCG ACCTGCCCGA CGGACTGGAC TCGGTGGTGC ACGCGGCCGG GGTCGTCGAG 
CTGGGCGCCG TGGCCGCGCT CTCGGTGGCG GACTGGACCT CGCAGCTGCG GGTCAACCTG 
GTCGCGCCCG CCGCGCTGAC CCGGGTGGCA CTCCCCGCGC TGCGTGCCCG CCGCGGCACC 
GTGGTCTTCG TCAACTCCAG TGCCGGGCGG ACCGCCCACC CGTCGTGGTC GGCGTACGCC 
GCCTCCAAGC ACGGGCTGCG CGCCCTCGCG GACGCACTGC GCGCCGAGGA GGCGGAGCAC 
GGCGTCCGCG TGAGCACCGT CTTCCCGGGT CGCACGGCCA CGCCGATGCA GGAGAAGGTG 
CACCGGCAGG AGGGCAGGGA GTACGACGCC GCCCGGTGGG TCCGGCCCGA GACCGTCGCC 
GACACGATCC TGCACGTGCT CGACCTGCCG GCCGACGCGA CGATCCCGGA AGTGGTGGTC 
AGGCCGGGCC CGAGCGCCAG TTGA 

 

Protein sequence

MIHLLTGAGS GIGAELARRL HERGDDLVLL ARSPERAAEL RTAYAGATVL VADLARPESV 
ESLDLPDGLD SVVHAAGVVE LGAVAALSVA DWTSQLRVNL VAPAALTRVA LPALRARRGT 
VVFVNSSAGR TAHPSWSAYA ASKHGLRALA DALRAEEAEH GVRVSTVFPG RTATPMQEKV 
HRQEGREYDA ARWVRPETVA DTILHVLDLP ADATIPEVVV RPGPSAS