Gene Noca_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1722 
Symbol 
ID4598484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1832411 
End bp1833025 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content67% 
IMG OID639776321 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_922922 
Protein GI119715957 
COG category[K] Transcription 
COG ID[COG1395] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCCGC CGAAGACGGT CATCGAGATC GCCCGCAAGG CCGCGGGTCT GTCGCAGGCG 
CAGCTGGCGA TGAAGGCGGG CACCGCGCAA TCGTCGGTCT CGGAGTACGA GTCCCGCCGC 
AAGTCGCCGA CCTTGGAGGT GGTGGAGCGG CTCCTGGAGT CCGCCGACGC CGAGCTCACG 
ATCAAGCCGA TCATCGACTT CGACACTCGG CAGGACCCCG AGATCGGCCG GTACGTCGTG 
CCCGAAAAGC TCTGGTCGGT GCCGATGCCG GACTGCTTCA GCAAGATCCA GGTTCTGGGA 
TACCTCGCCA AGTCCCGCCG ACCGCTCGTC TGGGACCTGT CGAACGAGGC CGAGCGCATC 
GACTACTACG CGTGGGTCAT CGGGCTCGGC GCCATCGATC TGATGCTCGA CTCCGTCGAC 
GGGATCTTGT TGATGCAGGT TTGGGAGCGG CTGAACCTTC CGAGCGTGAT CCGGGCAGCG 
TGGCAGCCTG TCGTCGACGC GGCCACCGCC CCCCAGGACA AACAGCCCCG CGACCCTGCC 
GGATTCAGCG CGTGGCTCGC AGGCGAGATC GGCGTCGAGT GGCGACCGGT CCGCCGGCGC 
AAGCCGCGTC AGTGA
 
Protein sequence
MYPPKTVIEI ARKAAGLSQA QLAMKAGTAQ SSVSEYESRR KSPTLEVVER LLESADAELT 
IKPIIDFDTR QDPEIGRYVV PEKLWSVPMP DCFSKIQVLG YLAKSRRPLV WDLSNEAERI 
DYYAWVIGLG AIDLMLDSVD GILLMQVWER LNLPSVIRAA WQPVVDAATA PQDKQPRDPA 
GFSAWLAGEI GVEWRPVRRR KPRQ